Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0613 ATGAAAGCAAACTTTGATCTCGAAGTGGAGGCCTCCGCAGACAGTGAATTTGAAGTTAACAGCCAGGTTGCTTCTAATATATCCACTCAGGAAACCATCGCAGGTCCTTGTAGCGATCAAACCCTGACAAACTCTTCCAAACCAGGAAATTCAACAGAGATACTTGATGCAAATTCTAATCCCGTTTCACTTGACCTGACTCTCAACTTAAATAATAATGAGTTAGCAGGGTCAAGAGATTCTGTACGACTCTCATTCTCAAGCACTAGCGAGAGTAGCAATGAACCTGTCTCTCAGACTACAGAAGCGACCATTGCCAGAGTTTTCCCATGCAATTACTGCCAACGCAAGTTCTTCAGCTCCCAGGCTCTTGGGGGCCACCAAAATGCACACAAGAGAGAAAGATCATTGGCAAAGCATGCTATGAGGATGGGTTTTTTCTCTGAGAGGTATGCAAGTCTAGCATCTCTCCCTCTAAATGATACCTCCAGATCTTTGGGAATAAAAGCGCATTCTTCACAGCACTATGGCTTTTCACCATCAGTGAAGCTTCAAGAGATGAAAAACAATACTAGATTTGAGATAGGATATTTTGGCCAGCCAATTTTCTTGGAGGAGAATGAACCAGGACTTATTTGGCCTGGTAGTTTCCGTCAGATCGCAGAGATAGGTGATGATCATAAGAATTTTCTGCTGACTGAGAGTTCTGGTTTGAGTTTTACGGAGGTGAATCCACCAGTGGACATAGAGAAGTCCACCCCGGATTTGACATTAAAACTCTGA 783 0.4342 MKANFDLEVEASADSEFEVNSQVASNISTQETIAGPCSDQTLTNSSKPGNSTEILDANSNPVSLDLTLNLNNNELAGSRDSVRLSFSSTSESSNEPVSQTTEATIARVFPCNYCQRKFFSSQALGGHQNAHKRERSLAKHAMRMGFFSERYASLASLPLNDTSRSLGIKAHSSQHYGFSPSVKLQEMKNNTRFEIGYFGQPIFLEENEPGLIWPGSFRQIAEIGDDHKNFLLTESSGLSFTEVNPPVDIEKSTPDLTLKL 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0613 260 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 24 184 IPR044246 GO:0009788
Prci8g0613 260 Gene3D Classic Zinc Finger 85 154 - -
Prci8g0613 260 ProSitePatterns Zinc finger C2H2 type domain signature. 111 131 IPR013087 -
Prci8g0613 260 MobiDBLite consensus disorder prediction 34 56 - -
Prci8g0613 260 ProSiteProfiles Zinc finger C2H2 type domain profile. 109 136 IPR013087 -
Prci8g0613 260 SUPERFAMILY beta-beta-alpha zinc fingers 107 136 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0613 Prci-Chr8 4070831 4074822 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0613 59 260 C2H2 Transcription Factor Family AT1G24625 41.429 6.60e-36 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Prci8g0613 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0613 - - gmx:100788768 340.887