Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0606 ATGCCCTTACAAGGGATTGCGATCGAGCCCAGTTCCACATCATGTTCTCCTCCTGATCTTTCCCTTCACATAAGCCCTCCGACCACCTCTTCTTCTTCTTCTTTGATTCGCCACAGTAAGGAACCCCACACTTCAAATTTGGCAACTCAGACTCGTGTCGAGCTCTCTCTGGCCACCAATTTCTGCGCAGACCAACCTCCTCCTTGTCATTATCATCACAATCACAACCCCACCATTGCAGCTTCTGCAACCATCACCACCGCTCACTTGAACCCCATGAATTCGTTCCTTGATGCGCCGTCATCGTCCCAGTCGGACGTCGGCCTGAGACCGATCAGGGGGATCCCGGTGTATCACAACCGTTGCTTCCCTTTCTTGCCCTCAGACCATTCCATCGGCAAGGATCTTCACCACCACCACCACCGCCAACATTATCAGAAGATGTGGTTGCATCATCCCTTGCCCTCTAACGGATCTTCTTGGGCATATTATAATAACTATAACAGTAATACGACCGAAGTATCGGGTTTGGATAACCCGATGTGGGTTTTAAACGGGTCGTCTCCTGGTAATTTCAAATCTCAACACCAGTTGCACTGTGAGGTTGGGGCTTCTCATGGTGAAGAGGCCGCATCTTCGGGGTTCATGAGATCCAGATTTATGCCTAAAGTACTACCCTCCAAGAGGAGCATGAGAGCTCCCAGAATGCGTTGGACTACCACCCTCCATGCCAGATTCGTTCACGCCGTTCAACTTCTTGGCGGCCATGAAAGAGCTACTCCAAAGTCAGTACTGGAGCTGATGGATGTGAAAGATCTCACATTAGCTCATGTTAAAAGCCATTTACAGATGTATCGCACAGTCAAGACCACTGACAAGCCTGCTGCTTCCTCAGGCCAATCAGATGGATCTGGTGAAGATGAGATGTCTCCCGTCGGTGGCAACGCCGATCGTGGTGGTCTTTGTCAGTTGTCCAATCAAAGAGGCCGAGCAGATCGATCTGTGCAACAGGACCCAGACCATCCTTCTTCCACTACGCTATGGAGTAATTCTTCAAGCAGAGAGGCATGGCCACAGAACAATTGTTATAAGGATAGTCTCAGAAAAACTAGCTTCCACTCACAACCGATGTCAAGAGGGCATCAAACTCGTCATCAGGAATGCAATTCAAGCGAAGCAAGAATCGTGAAGAAGAATTTGTCAGATGTTGACATGGAATGCAAGAACCCATGCTTGGAGTTTACATTAGGAAGACCAGATTGGAATGGCAAGGGACAAGCCTAG 1284 0.4907 MPLQGIAIEPSSTSCSPPDLSLHISPPTTSSSSSLIRHSKEPHTSNLATQTRVELSLATNFCADQPPPCHYHHNHNPTIAASATITTAHLNPMNSFLDAPSSSQSDVGLRPIRGIPVYHNRCFPFLPSDHSIGKDLHHHHHRQHYQKMWLHHPLPSNGSSWAYYNNYNSNTTEVSGLDNPMWVLNGSSPGNFKSQHQLHCEVGASHGEEAASSGFMRSRFMPKVLPSKRSMRAPRMRWTTTLHARFVHAVQLLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKPAASSGQSDGSGEDEMSPVGGNADRGGLCQLSNQRGRADRSVQQDPDHPSSTTLWSNSSSREAWPQNNCYKDSLRKTSFHSQPMSRGHQTRHQECNSSEARIVKKNLSDVDMECKNPCLEFTLGRPDWNGKGQA 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0606 427 MobiDBLite consensus disorder prediction 7 48 - -
Prci8g0606 427 Pfam Myb-like DNA-binding domain 235 286 IPR001005 -
Prci8g0606 427 NCBIfam myb-like DNA-binding domain, SHAQKYF class 234 287 IPR006447 GO:0003677
Prci8g0606 427 SUPERFAMILY Homeodomain-like 231 287 IPR009057 -
Prci8g0606 427 MobiDBLite consensus disorder prediction 287 305 - -
Prci8g0606 427 Gene3D - 233 290 - -
Prci8g0606 427 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 18 424 IPR044847 GO:0000976|GO:0006355|GO:0010158
Prci8g0606 427 MobiDBLite consensus disorder prediction 1 48 - -
Prci8g0606 427 FunFam Myb family transcription factor 232 290 - -
Prci8g0606 427 MobiDBLite consensus disorder prediction 287 356 - -
Prci8g0606 427 MobiDBLite consensus disorder prediction 327 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0606 Prci-Chr8 4058708 4063407 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0606 110 424 G2-like Transcription Factor Family AT5G16560 47.432 1.98e-70 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Prci8g0606 Myb_DNA-binding 1.8e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0606 - - ccaj:109796302 385.185