Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci8g0605 | ATGCCCTTACAAGGGATTGCGATCGAGCCCAGTTCCACATCATGTTCTCCTCCTGATCTTTCCCTTCACATAAGCCCTCCGACCACCTCTTCTTCTTCTTCTTTGATTCGCCACAGTAAGGAACCCCACACTTCAAATTTGGCAACTCAGACTCGTGTCGAGCTCTCTCTGGCCACCAATTTCTGCGCAGACCAACCTCCTCCTTGTCATTATCATCACAATCACAACCCCACCATTGCAGCTTCTGCAACCATCACCACCGCTCACTTGAACCCCATGAATTCGTTCCTTGATGCGCCGTCATCGTCCCAGTCGGACGTCGGCCTGAGACCGATCAGGGGGATCCCGGTGTATCACAACCGTTGCTTCCCTTTCTTGCCCTCAGACCATTCCATCGGCAAGGATCTTCACCACCACCACCACCGCCAACATTATCAGAAGATGTGGTTGCATCATCCCTTGCCCTCTAACGGATCTTCTTGGGCATATTATAATAACTATAACAGTAATACGACCGAAGTATCGGGTTTGGATAACCCGATGTGGGTTTTAAACGGGTCGTCTCCTGGTAATTTCAAATCTCAACACCAGTTGCACTGTGAGGTTGGGGCTTCTCATGGTGAAGAGGCCGCATCTTCGGGGTTCATGAGATCCAGATTTATGCCTAAAGTACTACCCTCCAAGAGGAGCATGAGAGCTCCCAGAATGCGTTGGACTACCACCCTCCATGCCAGATTCGTTCACGCCGTTCAACTTCTTGGCGGCCATGAAAGAGCTACTCCAAAGTCAGTACTGGAGCTGATGGATGTGAAAGATCTCACATTAGCTCATGTTAAAAGCCATTTACAGATGTATCGCACAGTCAAGACCACTGACAAGCCTGCTGCTTCCTCAGGCCAATCAGATGGATCTGGTGAAGATGAGATGTCTCCCGTCGGTGGCAACGCCGATCGTGGTGGTCTTTGTCAGTTGTCCAATCAAAGAGGCCGAGCAGATCGATCTGTGCAACAGGACCCAGACCATCCTTCTTCCACTACGCTATGGAGTAATTCTTCAAGTAGCAGAGAGGCATGGCCACAGAACAATTGTTATAAGGATAGTCTCAGAAAAACTAGCTTCCACTCACAACCGATGTCAAGAGGGCATCAAACTCGTCATCAGGAATGCAATTCAAGCGAAGCAAGAATCGTGAAGAAGAATTTGTCAGATGTTGACATGGAATGCAAGAACCCATGCTTGGAGTTTACATTAGGAAGACCAGATTGGAATGGCAAGGGACAAGCCTAG | 1287 | 0.4903 | MPLQGIAIEPSSTSCSPPDLSLHISPPTTSSSSSLIRHSKEPHTSNLATQTRVELSLATNFCADQPPPCHYHHNHNPTIAASATITTAHLNPMNSFLDAPSSSQSDVGLRPIRGIPVYHNRCFPFLPSDHSIGKDLHHHHHRQHYQKMWLHHPLPSNGSSWAYYNNYNSNTTEVSGLDNPMWVLNGSSPGNFKSQHQLHCEVGASHGEEAASSGFMRSRFMPKVLPSKRSMRAPRMRWTTTLHARFVHAVQLLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKPAASSGQSDGSGEDEMSPVGGNADRGGLCQLSNQRGRADRSVQQDPDHPSSTTLWSNSSSSREAWPQNNCYKDSLRKTSFHSQPMSRGHQTRHQECNSSEARIVKKNLSDVDMECKNPCLEFTLGRPDWNGKGQA | 428 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci8g0605 | 428 | MobiDBLite | consensus disorder prediction | 7 | 48 | - | - | |
Prci8g0605 | 428 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 234 | 287 | IPR006447 | GO:0003677 | |
Prci8g0605 | 428 | SUPERFAMILY | Homeodomain-like | 231 | 287 | IPR009057 | - | |
Prci8g0605 | 428 | MobiDBLite | consensus disorder prediction | 287 | 305 | - | - | |
Prci8g0605 | 428 | Gene3D | - | 233 | 290 | - | - | |
Prci8g0605 | 428 | Pfam | Myb-like DNA-binding domain | 235 | 286 | IPR001005 | - | |
Prci8g0605 | 428 | MobiDBLite | consensus disorder prediction | 1 | 48 | - | - | |
Prci8g0605 | 428 | FunFam | Myb family transcription factor | 232 | 290 | - | - | |
Prci8g0605 | 428 | PANTHER | TRANSCRIPTION FACTOR KAN2-RELATED | 18 | 425 | IPR044847 | GO:0000976|GO:0006355|GO:0010158 | |
Prci8g0605 | 428 | MobiDBLite | consensus disorder prediction | 327 | 360 | - | - | |
Prci8g0605 | 428 | MobiDBLite | consensus disorder prediction | 287 | 360 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci8g0605 | Prci-Chr8 | 4058708 | 4063407 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci8g0605 | 1 | 425 | G2-like Transcription Factor Family | AT5G16560 | 41.357 | 2.24e-70 | 226 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | GARP-G2-like | Prci8g0605 | Myb_DNA-binding | 1.8e-05 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci8g0605 | - | - | ccaj:109796302 | 390.193 |