Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0590 ATGGCACCAGTTTCACTGCCTCCTGGTTTCAGGTTCCACCCTACGGATGAAGAGCTGGTTGCTTACTATCTCAAAAGAAAGATCAATGGCCACAGGATTGAGTTAGAGATCATCCCCGAAGTTGATCTCTACAAGTGCGAACCCTGGGACTTGCCTGGAAAGTCGTTGCTACCTGGCAAAGATTTGGAGTGGTATTTCTTCAGTCCTCGGGATAGGAAGTACCCAAACGGGTCAAGAACAAACCGAGCCACCAAATCCGGATATTGGAAGGCCACAGGCAAAGACAGGAAAGTGAATTCCCAATCTCGTGCAGTGGGTATGAAGAAAACCCTAGTTTACTATCGAGGCCGAGCCCCTCATGGTTGTCGTACCAACTGGGTTATGCATGAGTATCGTCTTGACGAGAGAGAATGTGAAGCTGCTTCTTCTGGCCTTCAGGATGCATATGCTCTCTGTCGTGTGTTCAAGAAGACTGCAGTTATAACCACGAAAATCGGAGACCACTACGTGAGTGGGAATCAGATTATTACAAGTGACCAGTCATCCAGCATTGAACTGTACTCCGAAGGAAGATCAGGAGAAGATTTAGAGAGCTCAGATTATTTGATGCCTCTGGATCATAGCTCATCACCCAACATTGGAAATGCCCCTTCATCAGGACCAAGAGATCATGGCAAATGGTCACAGGCACAGTTCATATCTGAAGATCCCTTCTTTCTTCCAGATTCCTCTTCACTATTTTCCAACTATGGCTCCATGCCCTACCCTCCATCCAAGGTGGATATAGCACTAGAGTGTGCAAGGATGCAGCACAGGTTTTCTCCAATGGAGGACTTTCCTTCAGAACTGAAGATGCAACCACAATATGGTGGGCCAAAAAATGAAACTGATGAGTTATTACAGGAGATTCTCTCAGTTGCTCATGCTTCTCAGGATCTCATAAACCAGTCTTCTAAATATTCTTCTCACTCATGGGGTGCTACTAGCACAGCAAACCAACATCATTACGCTCCTTCTGAACGAGAAGAAGATTTCACCTTCATGGTTGGCCGAGATAGTACTGCTAATGACTATAACTATTATAACAATGCCTGCTCGGAAGACCCAGTACTGCTAAACACAAGGTCGATAGAGATTGGAGATCTGGATGATGATTTCAAAGCAGAGAGGATCGTGGAGAATTTAAGATGGGTTGGTATGTCAAGCAAAGAGTTGGAATTTAAGAGCTTAACGGAAGGTCGAAAAATTGTTCCGATCGAGGATATTTCAAGTTTCCGAACAAACAGGGAGGGGAATGAACTGCTGCAAGCAGAATGTGATAATCAGCAAGAAAATAGAAGAAAGGAACTCAATGACACTGACATAAACGACATCTCATTAGAGTTTATCAACGAGGATGACACTAATGAGAACTTCATAGACGAAGAAGGCGATTATTCAAGTTCTCCAAGCTTTGAGGTGGTTGAGGAAGTCAAAGTCAGCCATGGAATGTTTGTGTCCACAAGACAAGTAGCTGACACATTCTTTCACCAAATAGTTCCTTCACAAACCCTCAAGGTTCACCTCAATCCAGTGATAATGGCGCACAATTATCACTCAGTGGAGAGCATAGACACAGTTTCTTTCTTTAGAAACTTGAAGGCCTGTGCGAAAACAATATCAAGTCCCATAATATTCATACTTTCGCTTCTGCTAATGCATTGTATTTATTATTCAGATTCTGATCAGGATGTGAAGGGGAGAAGTTGGAGTGGTGCTGCTAATAATTGCAATAACAGCATGAAGAGAATGAGAGAATATGATGATGATGAGAAAATCAAGTGGGATAATGAGAAGGAAAAGGTTTGGTTTGTGAGCACTAGAAGTGGGAAAGGATTCAGTGTGGTGTTGAAGAAGATAGGCATTTTTCTCACAATTTCTTTTGCTCTCTGTACCATGTGGGCTAACCACGTCATAGTTCATTAA 1965 0.4316 MAPVSLPPGFRFHPTDEELVAYYLKRKINGHRIELEIIPEVDLYKCEPWDLPGKSLLPGKDLEWYFFSPRDRKYPNGSRTNRATKSGYWKATGKDRKVNSQSRAVGMKKTLVYYRGRAPHGCRTNWVMHEYRLDERECEAASSGLQDAYALCRVFKKTAVITTKIGDHYVSGNQIITSDQSSSIELYSEGRSGEDLESSDYLMPLDHSSSPNIGNAPSSGPRDHGKWSQAQFISEDPFFLPDSSSLFSNYGSMPYPPSKVDIALECARMQHRFSPMEDFPSELKMQPQYGGPKNETDELLQEILSVAHASQDLINQSSKYSSHSWGATSTANQHHYAPSEREEDFTFMVGRDSTANDYNYYNNACSEDPVLLNTRSIEIGDLDDDFKAERIVENLRWVGMSSKELEFKSLTEGRKIVPIEDISSFRTNREGNELLQAECDNQQENRRKELNDTDINDISLEFINEDDTNENFIDEEGDYSSSPSFEVVEEVKVSHGMFVSTRQVADTFFHQIVPSQTLKVHLNPVIMAHNYHSVESIDTVSFFRNLKACAKTISSPIIFILSLLLMHCIYYSDSDQDVKGRSWSGAANNCNNSMKRMREYDDDEKIKWDNEKEKVWFVSTRSGKGFSVVLKKIGIFLTISFALCTMWANHVIVH 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0590 654 MobiDBLite consensus disorder prediction 203 225 - -
Prci8g0590 654 Coils Coil 432 452 - -
Prci8g0590 654 ProSiteProfiles NAC domain profile. 6 157 IPR003441 GO:0003677|GO:0006355
Prci8g0590 654 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Prci8g0590 654 Gene3D NAC domain 15 161 IPR036093 GO:0003677|GO:0006355
Prci8g0590 654 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
Prci8g0590 654 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 293 - -
Prci8g0590 654 MobiDBLite consensus disorder prediction 195 227 - -
Prci8g0590 654 FunFam Nac domain-containing protein 86 15 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0590 Prci-Chr8 3926757 3930598 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0590 1 646 NAC Transcription Factor Family AT1G65910 46.667 5.89e-170 498
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci8g0590 NAM 1.9e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0590 - - pcin:129318732 1322.38