Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0585 ATGACATCAGAGAATGTCATGGACGATAAGAAACTCTCCATTGCTGTTAATAACCACCCTTATCTCTCATCCGCCCAGATATTGACCGTTTGCTTATTATATGAAACGGGCAAAGGAAAATCTTCAAAGTGGCATCCTTACCTCATGCATTTGCCGCGTGCTTATGACATACTAGCTACATTTGGTGAATTTGAGAAACAAGCTCTTCAAGTGGATGAGGCTCGGTGGGTCGCAGAAAAGGCTATATTAAAGGCCAAATCAGAGTGGAAAGAAGCCAATGCTTTAATGGAAGAAATCAAACTCAAGTCCCAACTTTTAACGTTCAATGCATGGCTTTGGGCTACTGCAACGATATCCTCCCGGACGTTGCATGTATCATGGGATGAAGCTGGGTGTTTATGCCCTGTCGGTGACTTGTTTAATTATGACGCACCTGGAAGGGAGCCATCTGATCCGGAAGATAAGGAGATTCTAGTATCCAACTCTTCCTTCCATGTCTCTCCTGACTCAAATGTAGACAATACAGTAGTAATGTTAGATGCAGAAGAGCTCGATTCTCATTTCCAGAGGCTAACAGATGGTGGGTTTGAGGAAGATTTGAATTCATATTGCTTTTATGCTAGGGAAAATTACAAGCAAGGAGAGCAGGTTTTATTGTGCTACGGACTGTACACAAATTTAGAGCTTCTTGAACACTACGGGTTTCTCCTACAAGAAAATCCAAACGACAAAATCTTTATTCCTCTTGAATCTGCTGTATACTCTTCCAGTTCATGGCCGAAAGAGTCGCTCTATGTTGGCCATGATGGGAAGCCTTCCTTCGCATTACTGTCTGCATTGAGGTTGTGGGCAACCCCCAAAAATAAGCGTAAGTCTGTTGGCCATCTCGTGTATTCCGGTTCTCAGTTATCTGTAGACAATGAAATTGTTGTCATGAAATGGCTGTCAAAGACTTGCGATTCTGCGTTGAAGAGTTTACCGACATTGACTGATGAAGACGCAATACTCCTGAATGCAATGGATAATATTCAAGATTTTTGTGGTTTCATGGAAATCACCAAAATGTTGTCTTCTCGGGATGAGATTTGTGCCTTTTTGGAAGCTAATAATGTGCAGGATGGCCATGGTTTAACAGACATGCTTGTATCGAGAAAAGCTAGAAGGTCCATGGCCAAGTGGAAATTGGCTGTTCTATGGCGGCTCAAGTATAAGAAAGCCCTTGGGAACTGTATCTCTTATTGCAATGAAATACTTGAGTCTCTCCAGACATATAATGCTGAAATGAAAAAGATTGAACGAAGTGTAGCCTAA 1311 0.4195 MTSENVMDDKKLSIAVNNHPYLSSAQILTVCLLYETGKGKSSKWHPYLMHLPRAYDILATFGEFEKQALQVDEARWVAEKAILKAKSEWKEANALMEEIKLKSQLLTFNAWLWATATISSRTLHVSWDEAGCLCPVGDLFNYDAPGREPSDPEDKEILVSNSSFHVSPDSNVDNTVVMLDAEELDSHFQRLTDGGFEEDLNSYCFYARENYKQGEQVLLCYGLYTNLELLEHYGFLLQENPNDKIFIPLESAVYSSSSWPKESLYVGHDGKPSFALLSALRLWATPKNKRKSVGHLVYSGSQLSVDNEIVVMKWLSKTCDSALKSLPTLTDEDAILLNAMDNIQDFCGFMEITKMLSSRDEICAFLEANNVQDGHGLTDMLVSRKARRSMAKWKLAVLWRLKYKKALGNCISYCNEILESLQTYNAEMKKIERSVA 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0585 436 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 2 357 - -
Prci8g0585 436 Gene3D set domain protein methyltransferase, domain 1 1 235 - -
Prci8g0585 436 Gene3D - 236 428 IPR036464 -
Prci8g0585 436 SUPERFAMILY SET domain 21 240 IPR046341 -
Prci8g0585 436 CDD SET_LSMT 1 236 - -
Prci8g0585 436 Pfam Rubisco LSMT substrate-binding 270 341 IPR015353 -
Prci8g0585 436 Coils Coil 414 434 - -
Prci8g0585 436 Pfam SET domain 40 222 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0585 Prci-Chr8 3858050 3861868 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0585 28 250 NAC Transcription Factor Family AT3G56570 23.106 1.64e-06 48.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Prci8g0585 Rubis-subs-bind 0.00011 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0585 - - gmx:100787452 635.95