Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0581 ATGGAAGAAGAAGAAGAAATACGAAGTCTGGCAAGCTTCCTAAGATGGGCAGGAGAGCTTGGAATATCAGACGTAGTAATCACGGATCAGCCTCAACATTCTCTTTCCTGCCTGGGTTATTCTCTCCGTGTCTCTCATTTTCCTCATTCTGGCGGTAGAGGTTTGAGTGCTGTACGGGATCTTAGGAGGGGAGAACTGATCCTCAGAGTTCCAAAATCTGCGTTAATGACATCAGAGAATGTCATGGACGATAAGAAACTCTCCATTGCTGTTAATAACCACCCTTATCTCTCATCCGCCCAGATATTGACCGTTTGCTTATTATATGAAACGGGCAAAGGAAAATCTTCAAAGTGGCATCCTTACCTCATGCATTTGCCGCGTGCTTATGACATACTAGCTACATTTGGTGAATTTGAGAAACAAGCTCTTCAAGTGGATGAGGCTCGGTGGGTCGCAGAAAAGGCTATATTAAAGGCCAAATCAGAGTGGAAAGAAGCCAATGCTTTAATGGAAGAAATCAAACTCAAGTCCCAACTTTTAACGTTCAATGCATGGCTTTGGGCTACTGCAACGATATCCTCCCGGACGTTGCATGTATCATGGGATGAAGCTGGGTGTTTATGCCCTGTCGGTGACTTGTTTAATTATGACGCACCTGGAAGGGAGCCATCTGATCCGGAAGATAAGGAGATTCTAGTATCCAACTCTTCCTTCCATGTCTCTCCTGACTCAAATGTAGACAATACAGTAGTAATGTTAGATGCAGAAGAGCTCGATTCTCATTTCCAGAGGCTAACAGATGGTGGGTTTGAGGAAGATTTGAATTCATATTGCTTTTATGCTAGGGAAAATTACAAGCAAGGAGAGCAGGTTTTATTGTGCTACGGACTGTACACAAATTTAGAGCTTCTTGAACACTACGGGTTTCTCCTACAAGAAAATCCAAACGACAAAATCTTTATTCCTCTTGAATCTGCTGTATACTCTTCCAGTTCATGGCCGAAAGAGTCGCTCTATGTTGGCCATGATGGGAAGCCTTCCTTCGCATTACTGTCTGCATTGAGGTTGTGGGCAACCCCCAAAAATAAGCGTAAGTCTGTTGGCCATCTCGTGTATTCCGGTTCTCAGTTATCTGTAGACAATGAAATTGTTGTCATGAAATGGCTGTCAAAGACTTGCGATTCTGCGTTGAAGAGTTTACCGACATTGACTGATGAAGACGCAATACTCCTGAATGCAATGGATAATATTCAAGATTTTTGTGGTTTCATGGAAATCACCAAAATGTTGTCTTCTCGGGATGAGATTTGTGCCTTTTTGGAAGCTAATAATGTGCAGGATGGCCATGGTTTAACAGACATGCTTGTATCGAGAAAAGCTAGAAGGTCCATGGCCAAGTGGAAATTGGCTGTTCTATGGCGGCTCAAGTATAAGAAAGCCCTTGGGAACTGTATCTCTTATTGCAATGAAATACTTGAGTCTCTCCAGACATATAATGCTGAAATGAAAAAGATTGAACGAAGTGTAGCCTAA 1536 0.4264 MEEEEEIRSLASFLRWAGELGISDVVITDQPQHSLSCLGYSLRVSHFPHSGGRGLSAVRDLRRGELILRVPKSALMTSENVMDDKKLSIAVNNHPYLSSAQILTVCLLYETGKGKSSKWHPYLMHLPRAYDILATFGEFEKQALQVDEARWVAEKAILKAKSEWKEANALMEEIKLKSQLLTFNAWLWATATISSRTLHVSWDEAGCLCPVGDLFNYDAPGREPSDPEDKEILVSNSSFHVSPDSNVDNTVVMLDAEELDSHFQRLTDGGFEEDLNSYCFYARENYKQGEQVLLCYGLYTNLELLEHYGFLLQENPNDKIFIPLESAVYSSSSWPKESLYVGHDGKPSFALLSALRLWATPKNKRKSVGHLVYSGSQLSVDNEIVVMKWLSKTCDSALKSLPTLTDEDAILLNAMDNIQDFCGFMEITKMLSSRDEICAFLEANNVQDGHGLTDMLVSRKARRSMAKWKLAVLWRLKYKKALGNCISYCNEILESLQTYNAEMKKIERSVA 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0581 511 CDD SET_LSMT 41 311 - -
Prci8g0581 511 Pfam SET domain 52 297 IPR001214 GO:0005515
Prci8g0581 511 Coils Coil 489 509 - -
Prci8g0581 511 Gene3D set domain protein methyltransferase, domain 1 8 310 - -
Prci8g0581 511 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 8 432 - -
Prci8g0581 511 Gene3D - 311 503 IPR036464 -
Prci8g0581 511 ProSiteProfiles SET domain profile. 40 297 IPR001214 GO:0005515
Prci8g0581 511 FunFam Protein SET DOMAIN GROUP 40 10 311 - -
Prci8g0581 511 Pfam Rubisco LSMT substrate-binding 345 416 IPR015353 -
Prci8g0581 511 SUPERFAMILY SET domain 41 315 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0581 Prci-Chr8 3857708 3861868 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0581 52 325 NAC Transcription Factor Family AT3G56570 22.540 3.44e-08 54.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Prci8g0581 SET 2.2e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0581 - - gmx:100787452 735.717