Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0546 ATGAACAATAACTCACTTACTGGACAAATACCTCCGGAGTTTTCCCGCTTGACAAGCCTTGCTCACCTCCTTCTAGACCATAACAAATTATCAGGATATCTTCCACTTGAGCTCTCCCAGATGCCAAGCATACGCATAATTCAACTTGATAACAATGACTTTGGTGGAACTACAATTCCAGATTCATATGGCAACATTTCAACATTGTTGAAGTTGAGCCTTAGGAACTGCAACTTGCAAGGACCAATCCCTGATTTAAGCAGCATACGAAACCTTCTTTATCTTGACCTCAGTTCCAATCAATTGAATGGTTCGATTCCTTCTAATAAACTTTCTGAAAGAGTCACAACCATTGATTTGTCAAACAACAAGCTAACTGGAACTATTCCATCCTACTTCTCTGATCTCCCAAGTCTTCAACTACTGGATTTTCGAAATAATGATCTTACAAGCATATCAAGCACTATTGATCTTCGTCCTAACATCACAGTCAGGCTCGAGGGGAATCCTCTTTGTTCCAATAACACTCTAGTTCAGCTCTGTGGATCTGCAAGTGCCAATGAAACAAACAACTTGAGTCCAACGGACTCCAGTGCTAACTGTCCCCCTCAAGCATGCCCTCCTCCTTATGAATATTCCAAAACATCTTCTGTGAAGTGTTTCTGTGCAGCGCCTTTGCTCATTGGTTATCGACTGAAAAGTCCTGGATTTTACGATTTTAATCCATACCAGGCAGATTTTGAGAACTTCCTGGCATCCAATTATAGTTTAATGAATAACCAGGTTGATATTGGCACCCCTGAATGGCAAGGACTTCGACTGAAAATGTACTTGAAGCTTTATCCGGAATCTATTGATAGCACAAGCTCCCGTAATTTCAACGAAAGCGAGGTTCTGCGTCTTTATAACATGTTCTCAGGATGGGTTGTTTCAGACAATGAATTTTTCGGACCTTATGAGCTGCTCAACTTCACTCTTCTGGATCTTTATAAAGATATGTTGATTGGCCCCACTACAAGCTCAGGGATAAGCAAGGGTGCTCTGGCTGGCATAATCTTAGGTACAATTGCCGGTGCAGTTACGGTATCTGCAATTGTGACTCTTCTTATCATGAGGGCACGGATGAGAGATTACAGTGCACTTTCATCAAAGCGACAATTTTCTAGGATATCAATAAAAATTGATGGTGTGCGGAGCTTCACTTATGAAGAAATGGCCTTGGCTACTAACAATTTTAGTGACTCCGCTCAAGCTGGCCAAGGGGGCTATGGTAAAGTTTATAAAGGTATTCTCTCTGATGGCACTGTTGTAGCAATAAAACGTGCACAGGTGGGATCACTGCAAGGTGAGAGGGAGTTCCTAACAGAAATAGAGTTACTATCAAGGTTGCATCATCGCAACCTCGTGACTTTGGTTGGATACTGTGATGAAGGAGGTGAACAGATGCTGGTTTATGAATTTATGCCAAATGGCACACTAAGGGATCATCTTTCTGCTAATTCTAAAGAACCTCTGAGTTTTGATATGAGATTGAGGATTGCACTAGGGTCAGCTAAAGGCATCCTGTACCTGCATACGGAAGCTGATCCTCCAATATTCCACCGAGATGTCAAGGCCAGCAACATACTATTGGACTCCAGGCTCAATGCAAAAGTTGCTGATTTTGGACTTTCACGTCTCGCTCCAGTTCCAGATACTGAAGGAATTGTGCCTGGTCATGTATCTACAGTGGTAAAGGGAACCCCGGGCTACCTTGATCCAGAGTACTTTCTAACTCATAAGTTGACTGACAAGAGTGATGTCTATAGTTTTGGTGTTGTTCTTCTCGAACTTTTGACAGGGAAGCCACCGATCTCACATGGCAAAAATCTTGTTAGAGAGGTTACTGTTGCATACCAGTCTGGGGAGGTATTCTCGGTTATCGACAGACGTGTGGGGTCGTATCCTTCTGAGCAGCTGGAGAAGTTCTTGAAACTGGCCCTCAAGTGTAGCCAAGACGAGCCAGATGCGCGACCTAAAATGGCAGAAGTGGTTCGAGAGCTTGAAAACATGTGGTCCATGATGCCCGAGTCCAATGCCAAGATACCTGAATATATATCCAGTGATTCTGGAAAATTATTCAGTTCAGCATCTTCGTCTTCTGTTACCAGAACTCCTTTTATATCGGGGGATATGTCTGGTAGCGGACTTGTTAGTGGAGTAGAGCCAACCATCAGGCCAAGGTAG 2226 0.4317 MNNNSLTGQIPPEFSRLTSLAHLLLDHNKLSGYLPLELSQMPSIRIIQLDNNDFGGTTIPDSYGNISTLLKLSLRNCNLQGPIPDLSSIRNLLYLDLSSNQLNGSIPSNKLSERVTTIDLSNNKLTGTIPSYFSDLPSLQLLDFRNNDLTSISSTIDLRPNITVRLEGNPLCSNNTLVQLCGSASANETNNLSPTDSSANCPPQACPPPYEYSKTSSVKCFCAAPLLIGYRLKSPGFYDFNPYQADFENFLASNYSLMNNQVDIGTPEWQGLRLKMYLKLYPESIDSTSSRNFNESEVLRLYNMFSGWVVSDNEFFGPYELLNFTLLDLYKDMLIGPTTSSGISKGALAGIILGTIAGAVTVSAIVTLLIMRARMRDYSALSSKRQFSRISIKIDGVRSFTYEEMALATNNFSDSAQAGQGGYGKVYKGILSDGTVVAIKRAQVGSLQGEREFLTEIELLSRLHHRNLVTLVGYCDEGGEQMLVYEFMPNGTLRDHLSANSKEPLSFDMRLRIALGSAKGILYLHTEADPPIFHRDVKASNILLDSRLNAKVADFGLSRLAPVPDTEGIVPGHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSFGVVLLELLTGKPPISHGKNLVREVTVAYQSGEVFSVIDRRVGSYPSEQLEKFLKLALKCSQDEPDARPKMAEVVRELENMWSMMPESNAKIPEYISSDSGKLFSSASSSSVTRTPFISGDMSGSGLVSGVEPTIRPR 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0546 741 ProSiteProfiles Leucine-rich repeat profile. 138 159 IPR001611 GO:0005515
Prci8g0546 741 ProSitePatterns Serine/Threonine protein kinases active-site signature. 532 544 IPR008271 GO:0004672|GO:0006468
Prci8g0546 741 Gene3D Transferase(Phosphotransferase) domain 1 488 700 - -
Prci8g0546 741 Pfam Leucine rich repeat 114 153 IPR001611 GO:0005515
Prci8g0546 741 Gene3D Ribonuclease Inhibitor 112 225 IPR032675 -
Prci8g0546 741 CDD STKc_IRAK 419 684 - -
Prci8g0546 741 SUPERFAMILY L domain-like 2 185 - -
Prci8g0546 741 Gene3D Phosphorylase Kinase; domain 1 374 487 - -
Prci8g0546 741 SMART serkin_6 412 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g0546 741 Gene3D Ribonuclease Inhibitor 1 111 IPR032675 -
Prci8g0546 741 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 488 697 - -
Prci8g0546 741 ProSiteProfiles Protein kinase domain profile. 412 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g0546 741 FunFam Leucine-rich repeat protein kinase family protein 376 487 - -
Prci8g0546 741 Pfam Protein tyrosine and serine/threonine kinase 417 681 IPR001245 GO:0004672|GO:0006468
Prci8g0546 741 PANTHER RECEPTOR-LIKE PROTEIN 55 1 685 - -
Prci8g0546 741 SUPERFAMILY Protein kinase-like (PK-like) 397 709 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0546 Prci-Chr8 3543473 3551846 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0546 1 695 Receptor kinase-like Gene Family AT5G01950 54.993 0.0 741
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Prci8g0546 PK_Tyr_Ser-Thr 2.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0546 - - pcin:129318464 1447.18