LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci8g0545	ATGGACTTTATGTGGAACAACATAAGTGGGAGTATACCAAAGGAAATTGGCAATATCAAAAGTTTGGTACTCTTGCTTCTGAATGGAAACAAATTAGTAGGTCAGCTGCCCGCAGAGCTTGGTTATCTTCCAAATCTTAATAGATTTCAAATTGATCAGAACAATATAACAGGACCTATTCCTCCATCGTTTGCAAACCTAACCACGACAAGGCACTTTCACATGAACAATAACTCACTTACTGGACAAATACCTCCGGAGTTTTCCCGCTTGACAAGCCTTGCTCACCTCCTTCTAGACCATAACAAATTATCAGGATATCTTCCACTTGAGCTCTCCCAGATGCCAAGCATACGCATAATTCAACTTGATAACAATGACTTTGGTGGAACTACAATTCCAGATTCATATGGCAACATTTCAACATTGTTGAAGTTGAGCCTTAGGAACTGCAACTTGCAAGGACCAATCCCTGATTTAAGCAGCATACGAAACCTTCTTTATCTTGACCTCAGTTCCAATCAATTGAATGGTTCGATTCCTTCTAATAAACTTTCTGAAAGAGTCACAACCATTGATTTGTCAAACAACAAGCTAACTGGAACTATTCCATCCTACTTCTCTGATCTCCCAAGTCTTCAACTACTGGATTTTCGAAATAATGATCTTACAAGCATATCAAGCACTATTGATCTTCGTCCTAACATCACAGTCAGGCTCGAGGGGAATCCTCTTTGTTCCAATAACACTCTAGTTCAGCTCTGTGGATCTGCAAGTGCCAATGAAACAAACAACTTGAGTCCAACGGACTCCAGTGCTAACTGTCCCCCTCAAGCATGCCCTCCTCCTTATGAATATTCCAAAACATCTTCTGTGAAGTGTTTCTGTGCAGCGCCTTTGCTCATTGGTTATCGACTGAAAAGTCCTGGATTTTACGATTTTAATCCATACCAGGCAGATTTTGAGAACTTCCTGGCATCCAATTATAGTTTAATGAATAACCAGGTTGATATTGGCACCCCTGAATGGCAAGGACTTCGACTGAAAATGTACTTGAAGCTTTATCCGGAATCTATTGATAGCACAAGCTCCCGTAATTTCAACGAAAGCGAGGTTCTGCGTCTTTATAACATGTTCTCAGGATGGGTTGTTTCAGACAATGAATTTTTCGGACCTTATGAGCTGCTCAACTTCACTCTTCTGGATCTTTATAAAGATATGTTGATTGGCCCCACTACAAGCTCAGGGATAAGCAAGGGTGCTCTGGCTGGCATAATCTTAGGTACAATTGCCGGTGCAGTTACGGTATCTGCAATTGTGACTCTTCTTATCATGAGGGCACGGATGAGAGATTACAGTGCACTTTCATCAAAGCGACAATTTTCTAGGATATCAATAAAAATTGATGGTGTGCGGAGCTTCACTTATGAAGAAATGGCCTTGGCTACTAACAATTTTAGTGACTCCGCTCAAGCTGGCCAAGGGGGCTATGGTAAAGTTTATAAAGGTATTCTCTCTGATGGCACTGTTGTAGCAATAAAACGTGCACAGGTGGGATCACTGCAAGGTGAGAGGGAGTTCCTAACAGAAATAGAGTTACTATCAAGGTTGCATCATCGCAACCTCGTGACTTTGGTTGGATACTGTGATGAAGGAGGTGAACAGATGCTGGTTTATGAATTTATGCCAAATGGCACACTAAGGGATCATCTTTCTGCTAATTCTAAAGAACCTCTGAGTTTTGATATGAGATTGAGGATTGCACTAGGGTCAGCTAAAGGCATCCTGTACCTGCATACGGAAGCTGATCCTCCAATATTCCACCGAGATGTCAAGGCCAGCAACATACTATTGGACTCCAGGCTCAATGCAAAAGTTGCTGATTTTGGACTTTCACGTCTCGCTCCAGTTCCAGATACTGAAGGAATTGTGCCTGGTCATGTATCTACAGTGGTAAAGGGAACCCCGGGCTACCTTGATCCAGAGTACTTTCTAACTCATAAGTTGACTGACAAGAGTGATGTCTATAGTTTTGGTGTTGTTCTTCTCGAACTTTTGACAGGGAAGCCACCGATCTCACATGGCAAAAATCTTGTTAGAGAGGTTACTGTTGCATACCAGTCTGGGGAGGTATTCTCGGTTATCGACAGACGTGTGGGGTCGTATCCTTCTGAGCAGCTGGAGAAGTTCTTGAAACTGGCCCTCAAGTGTAGCCAAGACGAGCCAGATGCGCGACCTAAAATGGCAGAAGTGGTTCGAGAGCTTGAAAACATGTGGTCCATGATGCCCGAGTCCAATGCCAAGATACCTGAATATATATCCAGTGATTCTGGAAAATTATTCAGTTCAGCATCTTCGTCTTCTGTTACCAGAACTCCTTTTATATCGGGGGATATGTCTGGTAGCGGACTTGTTAGTGGAGTAGAGCCAACCATCAGGCCAAGGTAG	2448	0.4277	MDFMWNNISGSIPKEIGNIKSLVLLLLNGNKLVGQLPAELGYLPNLNRFQIDQNNITGPIPPSFANLTTTRHFHMNNNSLTGQIPPEFSRLTSLAHLLLDHNKLSGYLPLELSQMPSIRIIQLDNNDFGGTTIPDSYGNISTLLKLSLRNCNLQGPIPDLSSIRNLLYLDLSSNQLNGSIPSNKLSERVTTIDLSNNKLTGTIPSYFSDLPSLQLLDFRNNDLTSISSTIDLRPNITVRLEGNPLCSNNTLVQLCGSASANETNNLSPTDSSANCPPQACPPPYEYSKTSSVKCFCAAPLLIGYRLKSPGFYDFNPYQADFENFLASNYSLMNNQVDIGTPEWQGLRLKMYLKLYPESIDSTSSRNFNESEVLRLYNMFSGWVVSDNEFFGPYELLNFTLLDLYKDMLIGPTTSSGISKGALAGIILGTIAGAVTVSAIVTLLIMRARMRDYSALSSKRQFSRISIKIDGVRSFTYEEMALATNNFSDSAQAGQGGYGKVYKGILSDGTVVAIKRAQVGSLQGEREFLTEIELLSRLHHRNLVTLVGYCDEGGEQMLVYEFMPNGTLRDHLSANSKEPLSFDMRLRIALGSAKGILYLHTEADPPIFHRDVKASNILLDSRLNAKVADFGLSRLAPVPDTEGIVPGHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSFGVVLLELLTGKPPISHGKNLVREVTVAYQSGEVFSVIDRRVGSYPSEQLEKFLKLALKCSQDEPDARPKMAEVVRELENMWSMMPESNAKIPEYISSDSGKLFSSASSSSVTRTPFISGDMSGSGLVSGVEPTIRPR	815

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci8g0545	815	CDD	STKc_IRAK	493	758	-	-
	Prci8g0545	815	FunFam	Leucine-rich repeat receptor protein kinase EMS1	36	135	-	-
	Prci8g0545	815	ProSiteProfiles	Leucine-rich repeat profile.	212	233	IPR001611	GO:0005515
	Prci8g0545	815	Gene3D	Phosphorylase Kinase; domain 1	448	561	-	-
	Prci8g0545	815	Gene3D	Transferase(Phosphotransferase) domain 1	562	774	-	-
	Prci8g0545	815	Gene3D	Ribonuclease Inhibitor	78	186	IPR032675	-
	Prci8g0545	815	FunFam	LRR receptor-like serine/threonine-protein kinase HSL2	562	771	-	-
	Prci8g0545	815	SUPERFAMILY	Protein kinase-like (PK-like)	471	783	IPR011009	-
	Prci8g0545	815	Pfam	Leucine rich repeat	188	227	IPR001611	GO:0005515
	Prci8g0545	815	Pfam	Leucine rich repeat	44	104	IPR001611	GO:0005515
	Prci8g0545	815	PANTHER	RECEPTOR-LIKE PROTEIN 55	3	759	-	-
	Prci8g0545	815	Gene3D	Ribonuclease Inhibitor	187	299	IPR032675	-
	Prci8g0545	815	ProSiteProfiles	Protein kinase domain profile.	486	760	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci8g0545	815	SMART	serkin_6	486	761	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci8g0545	815	SUPERFAMILY	L domain-like	2	247	-	-
	Prci8g0545	815	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	606	618	IPR008271	GO:0004672\|GO:0006468
	Prci8g0545	815	Gene3D	Ribonuclease Inhibitor	1	77	IPR032675	-
	Prci8g0545	815	FunFam	Leucine-rich repeat protein kinase family protein	450	561	-	-
	Prci8g0545	815	Pfam	Protein tyrosine and serine/threonine kinase	491	755	IPR001245	GO:0004672\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci8g0545	Prci-Chr8	3542072	3551846	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci8g0545	1	769	Receptor kinase-like Gene Family	AT5G01950	57.143	0.0	862

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-VIII-1	Prci8g0545		PK_Tyr_Ser-Thr	3.3e-46	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci8g0545	-		-	pcin:129318464	1589.32