Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0544 ATGAATCTTTCGAAGGTCGGGAAGTGTGAAGCTGTTTTCAGCTTCTGGTTCTGTTGCTGGTTGCTTCTGGTTACCTCACAGGATTCCGCCACTCACCCTACCGAAGTTGACGCATTGAAATCCATCAAGAGAAGTTTGATTGATCCTAATGGAAATCTGAGCAACTGGGATCGCGGAGATCCATGTACATCTAGCTGGAGCGGGGTTCATTGCTTCAACAGTACACAGGCTGATGGCTATTTACATGTTAGAGAACTGCGACTGCTGAATCTGAACTTGTCTGGAACATTGGCACCAGAGATTGGAAACTTGTCTTATCTGCAAATCTTGGACTTTATGTGGAACAACATAAGTGGGAGTATACCAAAGGAAATTGGCAATATCAAAAGTTTGGTACTCTTGCTTCTGAATGGAAACAAATTAGTAGGTCAGCTGCCCGCAGAGCTTGGTTATCTTCCAAATCTTAATAGATTTCAAATTGATCAGAACAATATAACAGGACCTATTCCTCCATCGTTTGCAAACCTAACCACGACAAGGCACTTTCACATGAACAATAACTCACTTACTGGACAAATACCTCCGGAGTTTTCCCGCTTGACAAGCCTTGCTCACCTCCTTCTAGACCATAACAAATTATCAGGATATCTTCCACTTGAGCTCTCCCAGATGCCAAGCATACGCATAATTCAACTTGATAACAATGACTTTGGTGGAACTACAATTCCAGATTCATATGGCAACATTTCAACATTGTTGAAGTTGAGCCTTAGGAACTGCAACTTGCAAGGACCAATCCCTGATTTAAGCAGCATACGAAACCTTCTTTATCTTGACCTCAGTTCCAATCAATTGAATGGTTCGATTCCTTCTAATAAACTTTCTGAAAGAGTCACAACCATTGATTTGTCAAACAACAAGCTAACTGGAACTATTCCATCCTACTTCTCTGATCTCCCAAGTCTTCAACTACTGGATTTTCGAAATAATGATCTTACAAGCATATCAAGCACTATTGATCTTCGTCCTAACATCACAGTCAGGCTCGAGGGGAATCCTCTTTGTTCCAATAACACTCTAGTTCAGCTCTGTGGATCTGCAAGTGCCAATGAAACAAACAACTTGAGTCCAACGGACTCCAGTGCTAACTGTCCCCCTCAAGCATGCCCTCCTCCTTATGAATATTCCAAAACATCTTCTGTGAAGTGTTTCTGTGCAGCGCCTTTGCTCATTGGTTATCGACTGAAAAGTCCTGGATTTTACGATTTTAATCCATACCAGGCAGATTTTGAGAACTTCCTGGCATCCAATTATAGTTTAATGAATAACCAGGTTGATATTGGCACCCCTGAATGGCAAGGACTTCGACTGAAAATGTACTTGAAGCTTTATCCGGAATCTATTGATAGCACAAGCTCCCGTAATTTCAACGAAAGCGAGGTTCTGCGTCTTTATAACATGTTCTCAGGATGGGTTGTTTCAGACAATGAATTTTTCGGACCTTATGAGCTGCTCAACTTCACTCTTCTGGATCTTTATAAAGATATGTTGATTGGCCCCACTACAAGCTCAGGGATAAGCAAGGGTGCTCTGGCTGGCATAATCTTAGGTACAATTGCCGGTGCAGTTACGGTATCTGCAATTGTGACTCTTCTTATCATGAGGGCACGGATGAGAGATTACAGTGCACTTTCATCAAAGCGACAATTTTCTAGGATATCAATAAAAATTGATGGTGTGCGGAGCTTCACTTATGAAGAAATGGCCTTGGCTACTAACAATTTTAGTGACTCCGCTCAAGCTGGCCAAGGGGGCTATGGTAAAGTTTATAAAGGTATTCTCTCTGATGGCACTGTTGTAGCAATAAAACGTGCACAGGTGGGATCACTGCAAGGTGAGAGGGAGTTCCTAACAGAAATAGAGTTACTATCAAGGTTGCATCATCGCAACCTCGTGACTTTGGTTGGATACTGTGATGAAGGAGGTGAACAGATGCTGGTTTATGAATTTATGCCAAATGGCACACTAAGGGATCATCTTTCTGCTAATTCTAAAGAACCTCTGAGTTTTGATATGAGATTGAGGATTGCACTAGGGTCAGCTAAAGGCATCCTGTACCTGCATACGGAAGCTGATCCTCCAATATTCCACCGAGATGTCAAGGCCAGCAACATACTATTGGACTCCAGGCTCAATGCAAAAGTTGCTGATTTTGGACTTTCACGTCTCGCTCCAGTTCCAGATACTGAAGGAATTGTGCCTGGTCATGTATCTACAGTGGTAAAGGGAACCCCGGGCTACCTTGATCCAGAGTACTTTCTAACTCATAAGTTGACTGACAAGAGTGATGTCTATAGTTTTGGTGTTGTTCTTCTCGAACTTTTGACAGGGAAGCCACCGATCTCACATGGCAAAAATCTTGTTAGAGAGGTTACTGTTGCATACCAGTCTGGGGAGGTATTCTCGGTTATCGACAGACGTGTGGGGTCGTATCCTTCTGAGCAGCTGGAGAAGTTCTTGAAACTGGCCCTCAAGTGTAGCCAAGACGAGCCAGATGCGCGACCTAAAATGGCAGAAGTGGTTCGAGAGCTTGAAAACATGTGGTCCATGATGCCCGAGTCCAATGCCAAGATACCTGAATATATATCCAGTGATTCTGGAAAATTATTCAGTTCAGCATCTTCGTCTTCTGTTACCAGAACTCCTTTTATATCGGGGGATATGTCTGGTAGCGGACTTGTTAGTGGAGTAGAGCCAACCATCAGGCCAAGGTAG 2775 0.4314 MNLSKVGKCEAVFSFWFCCWLLLVTSQDSATHPTEVDALKSIKRSLIDPNGNLSNWDRGDPCTSSWSGVHCFNSTQADGYLHVRELRLLNLNLSGTLAPEIGNLSYLQILDFMWNNISGSIPKEIGNIKSLVLLLLNGNKLVGQLPAELGYLPNLNRFQIDQNNITGPIPPSFANLTTTRHFHMNNNSLTGQIPPEFSRLTSLAHLLLDHNKLSGYLPLELSQMPSIRIIQLDNNDFGGTTIPDSYGNISTLLKLSLRNCNLQGPIPDLSSIRNLLYLDLSSNQLNGSIPSNKLSERVTTIDLSNNKLTGTIPSYFSDLPSLQLLDFRNNDLTSISSTIDLRPNITVRLEGNPLCSNNTLVQLCGSASANETNNLSPTDSSANCPPQACPPPYEYSKTSSVKCFCAAPLLIGYRLKSPGFYDFNPYQADFENFLASNYSLMNNQVDIGTPEWQGLRLKMYLKLYPESIDSTSSRNFNESEVLRLYNMFSGWVVSDNEFFGPYELLNFTLLDLYKDMLIGPTTSSGISKGALAGIILGTIAGAVTVSAIVTLLIMRARMRDYSALSSKRQFSRISIKIDGVRSFTYEEMALATNNFSDSAQAGQGGYGKVYKGILSDGTVVAIKRAQVGSLQGEREFLTEIELLSRLHHRNLVTLVGYCDEGGEQMLVYEFMPNGTLRDHLSANSKEPLSFDMRLRIALGSAKGILYLHTEADPPIFHRDVKASNILLDSRLNAKVADFGLSRLAPVPDTEGIVPGHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSFGVVLLELLTGKPPISHGKNLVREVTVAYQSGEVFSVIDRRVGSYPSEQLEKFLKLALKCSQDEPDARPKMAEVVRELENMWSMMPESNAKIPEYISSDSGKLFSSASSSSVTRTPFISGDMSGSGLVSGVEPTIRPR 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0544 924 CDD STKc_IRAK 602 867 - -
Prci8g0544 924 Gene3D Ribonuclease Inhibitor 32 187 IPR032675 -
Prci8g0544 924 Gene3D Phosphorylase Kinase; domain 1 557 670 - -
Prci8g0544 924 ProSiteProfiles Protein kinase domain profile. 595 869 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g0544 924 Gene3D Ribonuclease Inhibitor 296 408 IPR032675 -
Prci8g0544 924 SUPERFAMILY Protein kinase-like (PK-like) 580 892 IPR011009 -
Prci8g0544 924 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g06840 33 194 - -
Prci8g0544 924 Gene3D Ribonuclease Inhibitor 188 295 IPR032675 -
Prci8g0544 924 ProSiteProfiles Leucine-rich repeat profile. 321 342 IPR001611 GO:0005515
Prci8g0544 924 ProSitePatterns Serine/Threonine protein kinases active-site signature. 715 727 IPR008271 GO:0004672|GO:0006468
Prci8g0544 924 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 671 880 - -
Prci8g0544 924 Gene3D Transferase(Phosphotransferase) domain 1 671 883 - -
Prci8g0544 924 FunFam Leucine-rich repeat protein kinase family protein 559 670 - -
Prci8g0544 924 SMART serkin_6 595 870 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g0544 924 Pfam Leucine rich repeat 297 336 IPR001611 GO:0005515
Prci8g0544 924 Pfam Leucine rich repeat 153 213 IPR001611 GO:0005515
Prci8g0544 924 SUPERFAMILY L domain-like 47 366 - -
Prci8g0544 924 PANTHER RECEPTOR-LIKE PROTEIN 55 42 868 - -
Prci8g0544 924 Pfam Leucine rich repeat N-terminal domain 33 71 IPR013210 -
Prci8g0544 924 Pfam Protein tyrosine and serine/threonine kinase 600 864 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0544 Prci-Chr8 3540497 3551846 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0544 18 878 Receptor kinase-like Gene Family AT5G01950 57.637 0.0 979
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Prci8g0544 PK_Tyr_Ser-Thr 4.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0544 - - pcin:129318464 1806.96