Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0541 ATGAAGTTCTATTCAACTTCATTGCAACCTTTCCTTTTGGGTATGGTCATTCTTTTTCCTCTGGCTATTGCTGACTTAAATTCAGATAAGCAAGCCCTTCTTACTTTTGCCAATGCTATCCCCCATCGCCGGCACCTTAAGTGGGATCCATCCACCTCTGTCTGTAAGTCTTGGGTTGGCATCACTTGCAATCCAAATGGCACTCACGTTGTTTCTGTCAGGCTCCCTGGGATTGGACTTGTTGGATCCATCCCGACTAATACACTTGGAAAGCTTGACAACCTTAGAACTATAAGCCTTCGATCCAACCTAGTCAGTGGAAGTTTACCTGCTGATATTACTTCTCTTCCTTCTCTTCAGTATCTCTACCTCCAGCACAATAACCTTTCAGGTGATATACCTGCCTCATTTTCATCCCAACTAAATGTACTTGATCTGTCTTATAATTCTTTCACCGGTGTAATTCCAGAGACATTACAAAATTTAACAGGACTGACTAGATTATACCTGCAGAACAACACCCTTTCTGGACCGATACCTGATCTCAATGCCCCTAAGCTCAAGCTTTTGAACTTAAGTTACAACCAATTGAATGGCTCTATCCCGACTGCTCTTCAGAAATTTCCTAATTCATCCTTTGAAGGGAATTCTCACTTATGTGGGAAACCTCTAAAACCTTGCTTTCTGTCCCCCCCACCTCCTCCAGCCACACCATTGGCTCCAGGAAAACAAAGCTCCAAAAATAAATTAAGTAAAGTAGCTATCATTGCAATCGCTGTTGGAGGAGCTGTTCTGCTGTTACTTATAGCTCTTGTTATTCTTCTCTGCTGTTTAAAAAAGAAAGATGATGGAAGATCCAGTGTAATTAAAGGGAAGGGTCCTAGTGCTGGGAGGGGTGAGAAGCCAAAAGAAGAGTTTGGCAGTGGGGTGCAAGAACCGGAGAAAAACAAGCTGGTTTTCTTTGAGGGCTGTTCTTATAATTTTGATCTTGAGGATTTGCTAAGAGCTTCAGCTGAAGTCCTGGGAAAGGGTAGCTATGGTACTGCATATAAGGCTGTATTGGAGGAGTCTACTACTGTTGTGGTGAAAAGGTTGAAAGAAGTAGTGGTGGGGAAGAGAGACTTCGAACAGCAGATGGAGACTGTGGGAAGGGTTGGCCAGCATCCAAATGTTGTACCCCTTCGTGCTTATTATTACTCAAAGGATGAGAAGCTTTTAGTCTATGACTATATCCCAGGGGGCAACCTGTCGACCCTATTACATGGTAGCAGGTCAGGTGGAAGAGCTCCGTTAGATTGGGATTCCCGACTGAAGGTCTCCCTAGGAGCTGCCCGAGGAATTGCCCACATACATTCTGTTGGGGGTCCAAAATTCACTCATGGAAATATCAAGTCCTCAAATGTCCTCATCCAAGATAATGAAGCCTGCATTTCTGATTTTGGCTTGACCCCACTCATGAATGTTCCAGCAGCCCCCTCCAGAGCTGCAGGTTATCGTGCTCCCGAGGTGATCGAGACACGTAAACACACTCATAAATCAGATGTGTACAGCTTTGGTGTCCTCCTCCTGGAAATGCTTACAGGGAAAGCACCTCTCCAGTCACCAGGCCGTGATGATATGGTTGATCTCCCTAGATGGGTTCACTCTGTTGTTAGGGAGGAATGGACAGCTGAGGTTTTTGATGTGGAGCTAATGAGGTATCAAAACATCGAAGAAGAAATGGTTCAGATGTTGCAAATTGCCATGGCATGTGTGGCAAAGGTGCCGGATATGCGACCTACCATGGATGAAGTAGTGAGAATGATCGAAGAGATCCGGCAATCTGACTCAGAGAACCGGCCATCTTCGGAAGAGAATAAATCCAAGGACTCCAACGTTCAAACTCCATAA 1890 0.4487 MKFYSTSLQPFLLGMVILFPLAIADLNSDKQALLTFANAIPHRRHLKWDPSTSVCKSWVGITCNPNGTHVVSVRLPGIGLVGSIPTNTLGKLDNLRTISLRSNLVSGSLPADITSLPSLQYLYLQHNNLSGDIPASFSSQLNVLDLSYNSFTGVIPETLQNLTGLTRLYLQNNTLSGPIPDLNAPKLKLLNLSYNQLNGSIPTALQKFPNSSFEGNSHLCGKPLKPCFLSPPPPPATPLAPGKQSSKNKLSKVAIIAIAVGGAVLLLLIALVILLCCLKKKDDGRSSVIKGKGPSAGRGEKPKEEFGSGVQEPEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMETVGRVGQHPNVVPLRAYYYSKDEKLLVYDYIPGGNLSTLLHGSRSGGRAPLDWDSRLKVSLGAARGIAHIHSVGGPKFTHGNIKSSNVLIQDNEACISDFGLTPLMNVPAAPSRAAGYRAPEVIETRKHTHKSDVYSFGVLLLEMLTGKAPLQSPGRDDMVDLPRWVHSVVREEWTAEVFDVELMRYQNIEEEMVQMLQIAMACVAKVPDMRPTMDEVVRMIEEIRQSDSENRPSSEENKSKDSNVQTP 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0541 629 ProSiteProfiles Protein kinase domain profile. 335 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g0541 629 MobiDBLite consensus disorder prediction 604 620 - -
Prci8g0541 629 ProSitePatterns Protein kinases ATP-binding region signature. 341 372 IPR017441 GO:0005524
Prci8g0541 629 PANTHER OS05G0588300 PROTEIN 12 617 - -
Prci8g0541 629 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 411 617 - -
Prci8g0541 629 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
Prci8g0541 629 SUPERFAMILY L domain-like 35 226 - -
Prci8g0541 629 MobiDBLite consensus disorder prediction 296 310 - -
Prci8g0541 629 FunFam pollen receptor-like kinase 1 303 410 - -
Prci8g0541 629 FunFam Leucine-rich repeat receptor-like protein kinase 139 227 - -
Prci8g0541 629 Pfam Leucine Rich Repeat 186 208 IPR001611 GO:0005515
Prci8g0541 629 MobiDBLite consensus disorder prediction 285 310 - -
Prci8g0541 629 FunFam Leucine-rich repeat receptor-like protein kinase 28 138 - -
Prci8g0541 629 Pfam Leucine rich repeat 83 129 IPR001611 GO:0005515
Prci8g0541 629 Pfam Leucine rich repeat 136 175 IPR001611 GO:0005515
Prci8g0541 629 Gene3D Transferase(Phosphotransferase) domain 1 411 628 - -
Prci8g0541 629 Gene3D Ribonuclease Inhibitor 183 228 IPR032675 -
Prci8g0541 629 Pfam Protein kinase domain 338 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g0541 629 CDD STKc_IRAK 341 605 - -
Prci8g0541 629 Gene3D Phosphorylase Kinase; domain 1 303 410 - -
Prci8g0541 629 Gene3D Ribonuclease Inhibitor 26 182 IPR032675 -
Prci8g0541 629 SUPERFAMILY Protein kinase-like (PK-like) 339 612 IPR011009 -
Prci8g0541 629 MobiDBLite consensus disorder prediction 604 629 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0541 Prci-Chr8 3506248 3510973 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0541 3 627 Receptor kinase-like Gene Family AT5G58300 70.126 0.0 880
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Prci8g0541 Pkinase 1e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0541 - - gmx:100796171 986.482