Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0537 ATGGCAGATGACACACATGCTGGTCTTGCAGCAATCATGGCAAGTGAAAAACATAGTGATATTACGGAGGGCAGTGAAGAAATACCTCCGTCTGATCCCTTGTTTAAGAAGAAAAAGAACATTTTGATGCAAGATCCTGATGGTGGTTGCTCCAATGAGGGGCTCCAACTGCAGAATCATGCAGCTAACTCTTCTGAGGTGTGTAAAACAAGGCAGAAACCCCGACAAAAGCTCGTCAGAATTATAGTCACTGACCCTGATGCTACTGATACTGACTCTTGCACCAGCGAAGATGTTGAAAAACCTATAACGCCACGAGGAGGGGAGAGGCAAGTAACACAGATCTGCATTGACATTCCCTCAGATTCTGCTTCCTTATTTGTCTCTACTCCTTTTCCTGCCAAGGAAGACTTGACCCATGTTGGGAAACCAAAGAAATCATTCAACAATCATGTCTCAGTTGGCGGCCACAAGAAGTACAGGGGTGTTCGCCGGAGGAAATGGGGTCGGTGGGCTGCTGAAATCCGAGACCCTGCAAGTCGAAAAAGGCTCTGGCTTGGAACATTTGACACTGCAGAGGAAGCTGCCTCAGAGTATGACAGAGCTGCTGTGAAGCTCAGGGGTCCTGATGCCATCACCAACTTCCCTCTGTCGGTGACAAAGGAGGTGAAGCCTGCCACCATCCGTGATAGCTCAAGCACTGATAGTTTTATCTCATTCGGTGCACTGGCATCCCCAACCTCTGTGCTGTCTTAG 756 0.4841 MADDTHAGLAAIMASEKHSDITEGSEEIPPSDPLFKKKKNILMQDPDGGCSNEGLQLQNHAANSSEVCKTRQKPRQKLVRIIVTDPDATDTDSCTSEDVEKPITPRGGERQVTQICIDIPSDSASLFVSTPFPAKEDLTHVGKPKKSFNNHVSVGGHKKYRGVRRRKWGRWAAEIRDPASRKRLWLGTFDTAEEAASEYDRAAVKLRGPDAITNFPLSVTKEVKPATIRDSSSTDSFISFGALASPTSVLS 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0537 251 CDD AP2 158 218 IPR001471 GO:0003700|GO:0006355
Prci8g0537 251 Gene3D AP2/ERF domain 158 218 IPR036955 GO:0003700|GO:0006355
Prci8g0537 251 FunFam Ethylene-responsive transcription factor 2 158 217 - -
Prci8g0537 251 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 75 250 - -
Prci8g0537 251 SUPERFAMILY DNA-binding domain 159 218 IPR016177 GO:0003677
Prci8g0537 251 MobiDBLite consensus disorder prediction 19 34 - -
Prci8g0537 251 MobiDBLite consensus disorder prediction 1 34 - -
Prci8g0537 251 SMART rav1_2 159 222 IPR001471 GO:0003700|GO:0006355
Prci8g0537 251 PRINTS Ethylene responsive element binding protein signature 182 198 IPR001471 GO:0003700|GO:0006355
Prci8g0537 251 PRINTS Ethylene responsive element binding protein signature 160 171 IPR001471 GO:0003700|GO:0006355
Prci8g0537 251 ProSiteProfiles AP2/ERF domain profile. 159 216 IPR001471 GO:0003700|GO:0006355
Prci8g0537 251 Pfam AP2 domain 159 208 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0537 Prci-Chr8 3462853 3465527 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0537 57 251 AP2-EREBP Transcription Factor Family AT4G27950 40.976 1.61e-35 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci8g0537 AP2 3e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0537 K13434 - gmx:100800489 166.392