Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0524 ATGGGATCCGAGGTTTGTGTCGGTGTTTCCGGTGGGTCGGCCACGGCTCATGAATGGAAGAAGGGGTGGCCTCTTCCATCTGGTGGATTCGCCCAATTTTGTAACAACTGCGGAATTTCGATTGAATGCAAGCTTGACAACTTCGATTCCATATCTGCCTATGAGGCATCCATTTTCTGTAATAAATTCCACCTCGAAGAAACAGGTTGGAGGGACTGCAGCTTTTGCAACAAGCCTATCCACAGTGGATGCATAGTATCAAGGTATTTGTTCGACTACCTTGACTTTGGAGGTATAGGTTGCATCAGCTGTATAAAGGCTTCTCGATTGCTTCTGAACACTAAAGAACCTGATGGGGCTGTTACATCTACCACAACAAATGCAAGTGATTGTACTCCTCGTCAAATGGATGGGAAACTGTTGGTGGATAGTGTCGGTGAAGGAAAACTTATGCAATTATGCAGAATTGTTGAAGCTAGTGAGACTAATGGTTGGCATCAACCTCAAAGAGATAAAATGATCTCATCTAGTGGGCTAAAGAGCCAAGAAATTAAGTGTCTGACAAGGGATGTGGATTCAAGATTTTCAAATATGATTAAAACATCTATTCATTCACTAAAATTTCCTTTAGAAAATACTAGACCAACATGGGAGATTAAAAATATTCGTGAATCACCTGCACAACCATCTTTGAGTATGTCCCTGGGAATTCCATCAGGAAACTCTGCCCCTGCTTCTGCTGGAGAGATTGTAGAAGAAAGGCTTGAGGGCAAACCATCTTCTGTGTTTCATCAAGGGCAAAGATCTCACCCTGTATTTGCTAAACCATCAAAGACTGGTCTTGCCATGAACATAGAAACAAGCAAAGGAATGAATTCTCAGGCATGTGTTGCCCGGCCATCTGTTGAAGGAAGGGGCAAGAGTCAGCTACTTCCTCGGTACTGGCCTAGGATTACTGATGAAGAGCTGGAGCAATTGTCTGGAAATTTGAAATCCACTGTAGTGCCATTATTTGAGAAGGTGTTGAGTGCCAGTGATGCAGGTCGAATTGGGCGCCTTGTTCTTCCAAAAGCTTGTGCTGAAGCTTTTTTCCCTCCTATTTCTCAGTCAGAAGGTCTTCCTTTGGAAATGCAAGATGTGAAGGGAAATGAATGGACTTTTCAGTTCAGATTTTGGCCTAATAACAATAGTAGGATGTACGTACTGGAGGGTGTGACCCCTTGTATACAGTCAATGCAATTGATTGCGGGTGACACCGTAACATTTAGCAGGATTGATCCTGGGGGCAGATTTATTATGGGTTTCAGAAAGACATCAAATTCTCTAGAAACACAGGATGCGTCTACATCTACACATTCCAACGGGATTACAACAAAGGAAATAGTCAGTTCTGGTGCAAATGAGAACCTTCCTTCAGGAAGTAGTTATTCTGATCTTCTTCAGTCTATGGAAGGGAACAGGGAACCTCACTTAAATAGACAATCCGAACACCTGCATTTGGGTAGGAGGGTAGCTGACTTCCCTCAAACAGAAAATTATGGCCAGATGACAAAAAATGATTCACTGCAGCAATCAATTTCAGTTTCAGAGAAGAAAAGGACTCGGAATATTGGGCCTAAAAGTAAGAGGTTACTCATTAATTGTGAAGATGCTTTGGAGTTGAAACTGACGTGGGAGGAAGCACAAGACTTACTTCGTCCACCACCCAGTGTTCAGCCAATCATTGTTACGATTGAGGACCACATTTTTGAGGAGTACAATGAACCCCCAGTTTTTGGGAAGAGAACTATATTCATTGCCTGTCCATCTGGGGGACAGGAACAATGGGCTTCATGTGATGATTGCTCTAAATGGCGAAAACTACCTGTTGATGTTCTTCTACCTCCTAAGTGGACTTGTTCTGAAAACGTTTGGGATCCAACCAGGTCTTCATGTTCTGCACCTGAGGAGCTAAGGCCCAAGGAGTTGGAAGATCTTTTGAAATCCAGCGAAGTATTGGGAGATAGTCTCGGGGATCCTTCTGGGTCATCAGCAGGGCCCACCACCAAACATCCTAGGCATCGTCCTGGCTGCACCTGCATTGTCTGCATTCAGCCACCAAGTGGAAAGGGAAGACATCATTCTACCTGTACTTGCAATGTGTGTATGACTGTGAAAAGGCGGTTCAAAACCCTTATGTTGCGCAAGAAGAAACGCCAATCTGAGCGTGAAGCAGATGCTAGCCAGATGGATCATAGAGAAGAGTCAGATATGAATGGCGCACCTAAGGAAGACGCAAGCCATGCGGAGAAAGAGGGAAGCATAAATAGAGGACAGCTTGAGGTTTGTGAATCCAGTTCTGTACAGATAGATCTGAATAGCCATCCTGATCGCGAAGACATGCAAGTTGATGCACCAAGCATGAATGGTCATGTTGAAGGTCCAAGCTATCCAGTACAACAGGTATACGTGGATCAAAATGTCCCTAACGGAGGTCAGGGATACTTCTCTAATGGAGGAAGCTTTGGACCAATTGTCTGGGAGAATGAAACAAGAGAAGACAAGGCATTCTATGATCCCAATTCAAGTCAGAACAGTCCACCTTGA 2586 0.4404 MGSEVCVGVSGGSATAHEWKKGWPLPSGGFAQFCNNCGISIECKLDNFDSISAYEASIFCNKFHLEETGWRDCSFCNKPIHSGCIVSRYLFDYLDFGGIGCISCIKASRLLLNTKEPDGAVTSTTTNASDCTPRQMDGKLLVDSVGEGKLMQLCRIVEASETNGWHQPQRDKMISSSGLKSQEIKCLTRDVDSRFSNMIKTSIHSLKFPLENTRPTWEIKNIRESPAQPSLSMSLGIPSGNSAPASAGEIVEERLEGKPSSVFHQGQRSHPVFAKPSKTGLAMNIETSKGMNSQACVARPSVEGRGKSQLLPRYWPRITDEELEQLSGNLKSTVVPLFEKVLSASDAGRIGRLVLPKACAEAFFPPISQSEGLPLEMQDVKGNEWTFQFRFWPNNNSRMYVLEGVTPCIQSMQLIAGDTVTFSRIDPGGRFIMGFRKTSNSLETQDASTSTHSNGITTKEIVSSGANENLPSGSSYSDLLQSMEGNREPHLNRQSEHLHLGRRVADFPQTENYGQMTKNDSLQQSISVSEKKRTRNIGPKSKRLLINCEDALELKLTWEEAQDLLRPPPSVQPIIVTIEDHIFEEYNEPPVFGKRTIFIACPSGGQEQWASCDDCSKWRKLPVDVLLPPKWTCSENVWDPTRSSCSAPEELRPKELEDLLKSSEVLGDSLGDPSGSSAGPTTKHPRHRPGCTCIVCIQPPSGKGRHHSTCTCNVCMTVKRRFKTLMLRKKKRQSEREADASQMDHREESDMNGAPKEDASHAEKEGSINRGQLEVCESSSVQIDLNSHPDREDMQVDAPSMNGHVEGPSYPVQQVYVDQNVPNGGQGYFSNGGSFGPIVWENETREDKAFYDPNSSQNSPP 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0524 861 Pfam B3 DNA binding domain 338 436 IPR003340 GO:0003677
Prci8g0524 861 SMART B3_2 338 438 IPR003340 GO:0003677
Prci8g0524 861 MobiDBLite consensus disorder prediction 726 780 - -
Prci8g0524 861 ProSiteProfiles Zinc finger CW-type profile. 603 653 IPR011124 GO:0008270
Prci8g0524 861 Gene3D - 602 652 - -
Prci8g0524 861 SUPERFAMILY DNA-binding pseudobarrel domain 336 439 IPR015300 -
Prci8g0524 861 CDD B3_DNA 336 437 IPR003340 GO:0003677
Prci8g0524 861 FunFam B3 domain-containing transcription repressor VAL1 316 443 - -
Prci8g0524 861 Pfam CW-type Zinc Finger 608 650 IPR011124 GO:0008270
Prci8g0524 861 MobiDBLite consensus disorder prediction 730 770 - -
Prci8g0524 861 ProSiteProfiles B3 DNA-binding domain profile. 338 439 IPR003340 GO:0003677
Prci8g0524 861 MobiDBLite consensus disorder prediction 665 687 - -
Prci8g0524 861 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 5 825 - -
Prci8g0524 861 Gene3D - 316 442 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0524 Prci-Chr8 3398830 3405668 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0524 1 798 B3 DNA Binding Superfamily AT2G30470 46.265 0.0 647
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Prci8g0524 B3 8.8e-15 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0524 K09287 - gmx:100789848 1105.89