Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0518 ATGGGATCCGAGGTTTGTGTCGGTGTTTCCGGTGGGTCGGCCACGGCTCATGAATGGAAGAAGGGGTGGCCTCTTCCATCTGGTGGATTCGCCCAATTTTGTAACAACTGCGGAATTTCGATTGAATGCAAGCTTGACAACTTCGATTCCATATCTGCCTATGAGGCATCCATTTTCTGTAATAAATTCCACCTCGAAGAAACAGGTTGGAGGGACTGCAGCTTTTGCAACAAGCCTATCCACAGTGGATGCATAGTATCAAGGTATTTGTTCGACTACCTTGACTTTGGAGGTATAGGTTGCATCAGCTGTATAAAGGCTTCTCGATTGCTTCTGAACACTAAAGAACCTGATGGGGCTGTTACATCTACCACAACAAATGCAAGTGATTGTACTCCTCGTCAAATGGATGGGAAACTGTTGGTGGATAGTGTCGGTGAAGGAAAACTTATGCAATTATGCAGAATTGTTGAAGCTAGTGAGACTAATGGTTGGCATCAACCTCAAAGAGATAAAATGATCTCATCTAGTGGGCTAAAGAGCCAAGAAATTAAGTGTCTGACAAGGGATGTGGATTCAAGATTTTCAAATATGATTAAAACATCTATTCATTCACTAAAATTTCCTTTAGAAAATACTAGACCAACATGGGAGATTAAAAATATTCGTGAATCACCTGCACAACCATCTTTGAGTATGTCCCTGGGAATTCCATCAGGAAACTCTGCCCCTGCTTCTGCTGGAGAGATTGTAGAAGAAAGGCTTGAGGGCAAACCATCTTCTGTGTTTCATCAAGGGCAAAGATCTCACCCTGTATTTGCTAAACCATCAAAGACTGGTCTTGCCATGAACATAGAAACAAGCAAAGGAATGAATTCTCAGGCATGTGTTGCCCGGCCATCTGTTGAAGGAAGGGGCAAGAGTCAGCTACTTCCTCGGTACTGGCCTAGGATTACTGATGAAGAGCTGGAGCAATTGTCTGGAAATTTGAAATCCACTGTAGTGCCATTATTTGAGAAGGTGTTGAGTGCCAGTGATGCAGGTCGAATTGGGCGCCTTGTTCTTCCAAAAGCTTGTGCTGAAGCTTTTTTCCCTCCTATTTCTCAGTCAGAAGGTCTTCCTTTGGAAATGCAAGATGTGAAGGGAAATGAATGGACTTTTCAGTTCAGATTTTGGCCTAATAACAATAGTAGGATGATTGATCCTGGGGGCAGATTTATTATGGGTTTCAGAAAGACATCAAATTCTCTAGAAACACAGGATGCGTCTACATCTACACATTCCAACGGGATTACAACAAAGGAAATAGTCAGTTCTGGTGCAAATGAGAACCTTCCTTCAGGAAGTAGTTATTCTGATCTTCTTCAGTCTATGGAAGGGAACAGGGAACCTCACTTAAATAGACAATCCGAACACCTGCATTTGGGTAGGAGGGTAGCTGACTTCCCTCAAACAGAAAATTATGGCCAGATGACAAAAAATGATTCACTGCAGCAATCAATTTCAGTTTCAGAGAAGAAAAGGACTCGGAATATTGGGCCTAAAAGTAAGAGGTTACTCATTAATTGTGAAGATGCTTTGGAGTTGAAACTGACGTGGGAGGAAGCACAAGACTTACTTCGTCCACCACCCAGTGTTCAGCCAATCATTGTTACGATTGAGGACCACATTTTTGAGGAGTACAATGAACCCCCAGTTTTTGGGAAGAGAACTATATTCATTGCCTGTCCATCTGGGGGACAGGAACAATGGGCTTCATGTGATGATTGCTCTAAATGGCGAAAACTACCTGTTGATGTTCTTCTACCTCCTAAGTGGACTTGTTCTGAAAACGTTTGGGATCCAACCAGGTCTTCATGTTCTGCACCTGAGGAGCTAAGGCCCAAGGAGTTGGAAGATCTTTTGAAATCCAGCGAAGACTTTAAAAAACGAAGATTTGCTGAAAATAATAAGTCACCCCAAGAATTTGAATCTTCAGGCCTTGATGCTCTTGCTAATATGGCAGTATTGGGAGATAGTCTCGGGGATCCTTCTGGGTCATCAGCAGGGCCCACCACCAAACATCCTAGGCATCGTCCTGGCTGCACCTGCATTGTCTGCATTCAGCCACCAAGTGGAAAGGGAAGACATCATTCTACCTGTACTTGCAATGTGTGTATGACTGTGAAAAGGCGGTTCAAAACCCTTATGTTGCGCAAGAAGAAACGCCAATCTGAGCGTGAAGCAGATGCTAGCCAGATGGATCATAGAGAAGAGTCAGATATGAATGGCGCACCTAAGGAAGACGCAAGCCATGCGGAGAAAGAGGGAAGCATAAATAGAGGACAGCTTGAGGTTTGTGAATCCAGTTCTGTACAGATAGATCTGAATAGCCATCCTGATCGCGAAGACATGCAAGTTGATGCACCAAGCATGAATGGTCATGTTGAAGGTCCAAGCTATCCAGTACAACAGGTATACGTGGATCAAAATGTCCCTAACGGAGGTCAGGGATACTTCTCTAATGGAGGAAGCTTTGGACCAATTGTCTGGGAGAATGAAACAAGAGAAGACAAGGCATTCTATGATCCCAATTCAAGTCAGAACAGTCCACCTTGA 2598 0.4365 MGSEVCVGVSGGSATAHEWKKGWPLPSGGFAQFCNNCGISIECKLDNFDSISAYEASIFCNKFHLEETGWRDCSFCNKPIHSGCIVSRYLFDYLDFGGIGCISCIKASRLLLNTKEPDGAVTSTTTNASDCTPRQMDGKLLVDSVGEGKLMQLCRIVEASETNGWHQPQRDKMISSSGLKSQEIKCLTRDVDSRFSNMIKTSIHSLKFPLENTRPTWEIKNIRESPAQPSLSMSLGIPSGNSAPASAGEIVEERLEGKPSSVFHQGQRSHPVFAKPSKTGLAMNIETSKGMNSQACVARPSVEGRGKSQLLPRYWPRITDEELEQLSGNLKSTVVPLFEKVLSASDAGRIGRLVLPKACAEAFFPPISQSEGLPLEMQDVKGNEWTFQFRFWPNNNSRMIDPGGRFIMGFRKTSNSLETQDASTSTHSNGITTKEIVSSGANENLPSGSSYSDLLQSMEGNREPHLNRQSEHLHLGRRVADFPQTENYGQMTKNDSLQQSISVSEKKRTRNIGPKSKRLLINCEDALELKLTWEEAQDLLRPPPSVQPIIVTIEDHIFEEYNEPPVFGKRTIFIACPSGGQEQWASCDDCSKWRKLPVDVLLPPKWTCSENVWDPTRSSCSAPEELRPKELEDLLKSSEDFKKRRFAENNKSPQEFESSGLDALANMAVLGDSLGDPSGSSAGPTTKHPRHRPGCTCIVCIQPPSGKGRHHSTCTCNVCMTVKRRFKTLMLRKKKRQSEREADASQMDHREESDMNGAPKEDASHAEKEGSINRGQLEVCESSSVQIDLNSHPDREDMQVDAPSMNGHVEGPSYPVQQVYVDQNVPNGGQGYFSNGGSFGPIVWENETREDKAFYDPNSSQNSPP 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0518 865 Pfam B3 DNA binding domain 338 401 IPR003340 GO:0003677
Prci8g0518 865 SUPERFAMILY DNA-binding pseudobarrel domain 336 400 IPR015300 -
Prci8g0518 865 MobiDBLite consensus disorder prediction 734 774 - -
Prci8g0518 865 CDD B3_DNA 336 400 IPR003340 GO:0003677
Prci8g0518 865 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 400 829 - -
Prci8g0518 865 Pfam CW-type Zinc Finger 583 625 IPR011124 GO:0008270
Prci8g0518 865 Gene3D - 577 627 - -
Prci8g0518 865 ProSiteProfiles Zinc finger CW-type profile. 578 628 IPR011124 GO:0008270
Prci8g0518 865 MobiDBLite consensus disorder prediction 730 783 - -
Prci8g0518 865 Gene3D - 316 401 IPR015300 -
Prci8g0518 865 SMART B3_2 338 440 IPR003340 GO:0003677
Prci8g0518 865 MobiDBLite consensus disorder prediction 670 691 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0518 Prci-Chr8 3398830 3405669 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0518 1 802 B3 DNA Binding Superfamily AT2G30470 44.940 0.0 623
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Prci8g0518 B3 1.3e-07 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0518 K09287 - gmx:100789848 1099.35