Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0499 ATGTATGGCGGTAAAGAACACAAGGATGATATTAAAGGAGACCCCGGTTACGTGGAAACCGACCCAAGTGGTCGCTATGGGAGGTTTGGAGACATTCTTGGAAAAGGAGCGATGAAAACAGTATACAAAGCTTTTGATGAGGTCCTTGGAATAGAGGTGGCATGGAACCAGGTCAGACTCAATGCGGCACTTAGCACACCTGATGATTTGCAGCGGCTTTACTCAGAGGTTCATCTTCTCAGTACCCTCAAGCATCAATGCATCATAAGATTCTACACCTCCTGGATTGATGTTGATAAAAAGACATTCAACTTCATAACAGAAATGTTCACTTCAGGGACACTGAGAGAATACAGGAAGAAATATCAGCAAGTTGGCATACAAGCAATAAAGAATTGGGCTTGCCAAATCTTACAAGGTCTTGTTTACCTACACGACCATGATCCTCCAGTAATTCATAGGGACCTCAAATGTGATAACGTATTTGTCAATGGCCATCTTGGACAAGTGAAAATTGGTGATCTAGGACTAGCAGCTATTCTCCGTGGTTCCCATTCTGCCCACAGTGTTATAGGCACCCCAGAGTTCATGGCACCAGAATTATATGAAGAAGAATACAATGAACTTGTTGATGTGTACTCATTTGGCATGTGTGTTTTGGAAATGCTTACATCTGAATATCCATACAGTGAATGTGCTAATCCTGCACAGATCTACAAAAAAGTAACATCGGGAAAGCTACCTGCAGCACTTTTTCGGATTGAAGACACAGAAGCACAGAAGTTTGTTAGAAAATGCTTGGTAACAGCAACAGAAAGACCATCAGCAAAAGAATTATTGCTTGATCCATTTCTTTCATCTAATGACACAATATCAAATACAAAGTTTGAGATTCAAAAGCCACTGTTGAATGACATTGAGATAGAGAAATTGCGTTTGACCGATGGTTCACACAGGACCGGGATGAAAATCACTGGGAAGCTGAATCCGGAGGATGATACATTATTTCTCAAAGTGCAACTTACTGATAAAGATGGTTCTGCAAGGAACATTTATTTTCCCTTTGACATTTTAACGGATACTCCCATTGACGTTGCAATGGAGATGGTGAGGGAGTTGGAGATCACAGATTGGGAGCCATTTGAAATTTCAAGTATGATTGAAGCAGAGATATCTGCTCTGCTGCCACAAAGGAGGAGGGACTGTTTAGACACCTCTCATATGTTCAATTATCAGAATGATGACAACAATGAATCTCGATATCATTTTCACTCATTATCATCTTGTTCATCATCCCAAGAATCAGTATCAGGCATAATCACAAAAGCTGAGGAACTGCCCAATGGATATTACTGGCTTCATGATGACTTGATTGATGATTCCAGTTCCAGATGCTCTTCACAGGGGACATATTCCAATTTGAATTATGTTTATGCGGATGACCAGGAGTACAGTGTGACTTATACAAAAAAGGATAAACTACCAATCACTAAGAGTCACAAATGTAAAATGTTTTCCCCTGGTGAAGAACTAAGCAATGGATTGTCTCCGTCTGGAACAAGCTGCAACTACTGTAAAGTTATAGTAGGACCGTATGCTGCTTCATCTACTAGCAAAAACAAGAAGATAGACAATCGTAGATTGACAAGGAACAGTTCACTTGTTGATGTACATAGCCAGCTACTACACCGTTCCTTAGTTGATGAGGTAAGCAAGAGACGTTTATTCAAGACAGTCGGAGCTGTGGAAAATATTGGATTTCAGAATCCTCTTGAAGCTCCCAGAAAAAAATCACAACCAGTATGTGGTGCTTTGGATGTGAAATCTCCAAGGAGTGGCAAGGGACAAGAACTTGGGAGTTATTCTTTGAATATCAAAAGTGAAAAATATAGATAG 1896 0.403 MYGGKEHKDDIKGDPGYVETDPSGRYGRFGDILGKGAMKTVYKAFDEVLGIEVAWNQVRLNAALSTPDDLQRLYSEVHLLSTLKHQCIIRFYTSWIDVDKKTFNFITEMFTSGTLREYRKKYQQVGIQAIKNWACQILQGLVYLHDHDPPVIHRDLKCDNVFVNGHLGQVKIGDLGLAAILRGSHSAHSVIGTPEFMAPELYEEEYNELVDVYSFGMCVLEMLTSEYPYSECANPAQIYKKVTSGKLPAALFRIEDTEAQKFVRKCLVTATERPSAKELLLDPFLSSNDTISNTKFEIQKPLLNDIEIEKLRLTDGSHRTGMKITGKLNPEDDTLFLKVQLTDKDGSARNIYFPFDILTDTPIDVAMEMVRELEITDWEPFEISSMIEAEISALLPQRRRDCLDTSHMFNYQNDDNNESRYHFHSLSSCSSSQESVSGIITKAEELPNGYYWLHDDLIDDSSSRCSSQGTYSNLNYVYADDQEYSVTYTKKDKLPITKSHKCKMFSPGEELSNGLSPSGTSCNYCKVIVGPYAASSTSKNKKIDNRRLTRNSSLVDVHSQLLHRSLVDEVSKRRLFKTVGAVENIGFQNPLEAPRKKSQPVCGALDVKSPRSGKGQELGSYSLNIKSEKYR 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0499 631 Pfam Protein kinase domain 31 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g0499 631 FunFam Probable serine/threonine-protein kinase WNK1 12 108 - -
Prci8g0499 631 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g0499 631 CDD STKc_WNK 25 285 - -
Prci8g0499 631 Gene3D Phosphorylase Kinase; domain 1 12 108 - -
Prci8g0499 631 Gene3D Transferase(Phosphotransferase) domain 1 110 293 - -
Prci8g0499 631 SUPERFAMILY Protein kinase-like (PK-like) 29 286 IPR011009 -
Prci8g0499 631 FunFam probable serine/threonine-protein kinase WNK9 110 290 - -
Prci8g0499 631 MobiDBLite consensus disorder prediction 593 631 - -
Prci8g0499 631 SMART serkin_6 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g0499 631 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 13 466 - -
Prci8g0499 631 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0499 Prci-Chr8 3224538 3230099 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0499 17 596 MAP Kinase Kinase Kinase AT5G58350 57.338 0.0 625
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Prci8g0499 Pkinase 1.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0499 K08867 - gmx:100272203 854.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci8g0499 8 3224538 3230099 Prci8g0499 8 3224538 3230099 ECH