Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0498 ATGCGGCACTTAGCACACCTGATGATTTGCAGCGGCTTTACTCAGAGATACAGGAAGAAATATCAGCAAGTTGGCATACAAGCAATAAAGAATTGGGCTTGCCAAATCTTACAAGGTCTTGTTTACCTACACGACCATGATCCTCCAGTAATTCATAGGGACCTCAAATGTGATAACGTATTTGTCAATGGCCATCTTGGACAAGTGAAAATTGGTGATCTAGGACTAGCAGCTATTCTCCGTGGTTCCCATTCTGCCCACAGTGTTATAGGCACCCCAGAGTTCATGGCACCAGAATTATATGAAGAAGAATACAATGAACTTGTTGATGTGTACTCATTTGGCATGTGTGTTTTGGAAATGCTTACATCTGAATATCCATACAGTGAATGTGCTAATCCTGCACAGATCTACAAAAAAGTAACATCGGGAAAGCTACCTGCAGCACTTTTTCGGATTGAAGACACAGAAGCACAGAAGTTTGTTAGAAAATGCTTGGTAACAGCAACAGAAAGACCATCAGCAAAAGAATTATTGCTTGATCCATTTCTTTCATCTAATGACACAATATCAAATACAAAGTTTGAGATTCAAAAGCCACTGTTGAATGACATTGAGATAGAGAAATTGCGTTTGACCGATGGTTCACACAGGACCGGGATGAAAATCACTGGGAAGCTGAATCCGGAGGATGATACATTATTTCTCAAAGTGCAACTTACTGATAAAGATGGTTCTGCAAGGAACATTTATTTTCCCTTTGACATTTTAACGGATACTCCCATTGACGTTGCAATGGAGATGGTGAGGGAGTTGGAGATCACAGATTGGGAGCCATTTGAAATTTCAAGTATGATTGAAGCAGAGATATCTGCTCTGCTGCCACAAAGGAGGAGGGACTGTTTAGACACCTCTCATATGTTCAATTATCAGAATGATGACAACAATGAATCTCGATATCATTTTCACTCATTATCATCTTGTTCATCATCCCAAGAATCAGTATCAGGCATAATCACAAAAGCTGAGGAACTGCCCAATGGATATTACTGGCTTCATGATGACTTGATTGATGATTCCAGTTCCAGATGCTCTTCACAGGGGACATATTCCAATTTGAATTATGTTTATGCGGATGACCAGGAGTACAGTGTGACTTATACAAAAAAGGATAAACTACCAATCACTAAGAGTCACAAATGTAAAATGTTTTCCCCTGGTGAAGAACTAAGCAATGGATTGTCTCCGTCTGGAACAAGCTGCAACTACTGTAAAGTTATAGTAGGACCGTATGCTGCTTCATCTACTAGCAAAAACAAGAAGATAGACAATCGTAGATTGACAAGGAACAGTTCACTTGTTGATGTACATAGCCAGCTACTACACCGTTCCTTAGTTGATGAGGTAAGCAAGAGACGTTTATTCAAGACAGTCGGAGCTGTGGAAAATATTGGATTTCAGAATCCTCTTGAAGCTCCCAGAAAAAAATCACAACCAGTATGTGGTGCTTTGGATGTGAAATCTCCAAGGAGTGGCAAGGGACAAGAACTTGGGAGTTATTCTTTGAATATCAAAAGTGAAAAATATAGATAG 1593 0.3974 MRHLAHLMICSGFTQRYRKKYQQVGIQAIKNWACQILQGLVYLHDHDPPVIHRDLKCDNVFVNGHLGQVKIGDLGLAAILRGSHSAHSVIGTPEFMAPELYEEEYNELVDVYSFGMCVLEMLTSEYPYSECANPAQIYKKVTSGKLPAALFRIEDTEAQKFVRKCLVTATERPSAKELLLDPFLSSNDTISNTKFEIQKPLLNDIEIEKLRLTDGSHRTGMKITGKLNPEDDTLFLKVQLTDKDGSARNIYFPFDILTDTPIDVAMEMVRELEITDWEPFEISSMIEAEISALLPQRRRDCLDTSHMFNYQNDDNNESRYHFHSLSSCSSSQESVSGIITKAEELPNGYYWLHDDLIDDSSSRCSSQGTYSNLNYVYADDQEYSVTYTKKDKLPITKSHKCKMFSPGEELSNGLSPSGTSCNYCKVIVGPYAASSTSKNKKIDNRRLTRNSSLVDVHSQLLHRSLVDEVSKRRLFKTVGAVENIGFQNPLEAPRKKSQPVCGALDVKSPRSGKGQELGSYSLNIKSEKYR 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0498 530 ProSiteProfiles Protein kinase domain profile. 1 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g0498 530 Gene3D - 221 301 - -
Prci8g0498 530 FunFam probable serine/threonine-protein kinase WNK9 9 189 - -
Prci8g0498 530 Gene3D Transferase(Phosphotransferase) domain 1 12 192 - -
Prci8g0498 530 MobiDBLite consensus disorder prediction 492 530 - -
Prci8g0498 530 SMART serkin_6 3 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g0498 530 SUPERFAMILY Protein kinase-like (PK-like) 16 184 IPR011009 -
Prci8g0498 530 ProSitePatterns Serine/Threonine protein kinases active-site signature. 50 62 IPR008271 GO:0004672|GO:0006468
Prci8g0498 530 Pfam Protein kinase domain 15 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g0498 530 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 11 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0498 Prci-Chr8 3224538 3230099 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0498 8 495 MAP Kinase Kinase Kinase AT5G58350 52.834 2.93e-161 469
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Prci8g0498 Pkinase 7.2e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0498 K08867 - gmx:100272203 672.159