Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0492 ATGCCAGAGATCGAACGCTTGCCGGAGAACAAGAACGCTTTGTTTGGCAAATATGAACTCGGGAGGATTTTGGGCTGTGGGGCCTTCGCGAAGGTCTATTTTGCCCGTAATGTCCAGAACGGCCAGAGCGTCGCCATTAAGGTCATCAACAAAAAGAAGATATGCGGCACCGGCCTCATGTCTAACATCAAGCGTGAAATTACCATTATGAGTCGCCTCCATCACCCCAACATCGTGAGGCTCCACGAGGTCTTAGCCACCAAGACGAAGATCTACTTCGTCATGGAGTTCGTCAAGGGTGGCGAATTGTTTGCCAAGATTTCCAAGGGACGCTTCAGCGAGGATCTGAGCCGGAAGTATTTCCAACAGTTGATATCCGCCGTCGGGTACTGCCATTCCCGCGGCGTGTTCCACCGTGACTTGAAGCCCGAGAATCTCTTGCTCGACGAGAATGGGAATCTGAAGGTTTCGGACTTCGGACTCAGTGCCGTAAAAGATCAGAACCGACACGATGGTCTCCTTCATACGCTCTGCGGCACGCCGGCTTACGTCGCACCGGAGATTTTGGCCAAGCAAGGCTACGATGGAGCGAAGGTGGATGTGTGGTCCTGTGGCGTCATCCTCTTCGTGCTGACAGCTGGATACCTACCGTTCAACGACCCGAACCTCATTGCCATGTACAAGAAGATCTACAAAGGCGAATATCGGTGCCCCCGATGGATGTCGCCCGACCTCCGGCGTTTTCTGTCGCGGCTCCTGGACACCAACCCGGAGACCCGAATCACCATCGACGAGATCCTCCGGGACCCGTGGTTCAGGAAAGGGTACAAGGAGGTTAAATTTCATGAGGAACACTTCGGGTCTTCCTCATGGATGAAGTTCGATGAGGCGGAGAAGATGACTAATCTGAGCGCATTTGATATCATCTCGTTCTCCTCCGGGTTGAACCTGTCCGGTTTGTTTGATGATCCGGACAGCACAGCGGAGGAAAGCGACCGTTTCGTGTTGGCAGCGCCACCGGACAAGCTTATGGAGAGAGTGGAGGAGATCGCCAAGGTGGAGAAACTCGTCGTGAAGAGGAAGAAGGAATGTGGGGTGGAACTGGAGGGGCAGGAAGATAATTTCGGCATTACAGTTGTTGTTTACCGGTTCACGGAAAGCCTGGTATTAGTGGAGGCCCAATGGCGAGGCAGGGACGGTGTCAACTTGTGGAAGAACAGGCTTAAGCCTCAGCTCTGTGCTGCCACCAGTCAAGAAACAGATTCCCAGGTTGCCTGTGACTAA 1284 0.5335 MPEIERLPENKNALFGKYELGRILGCGAFAKVYFARNVQNGQSVAIKVINKKKICGTGLMSNIKREITIMSRLHHPNIVRLHEVLATKTKIYFVMEFVKGGELFAKISKGRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQNRHDGLLHTLCGTPAYVAPEILAKQGYDGAKVDVWSCGVILFVLTAGYLPFNDPNLIAMYKKIYKGEYRCPRWMSPDLRRFLSRLLDTNPETRITIDEILRDPWFRKGYKEVKFHEEHFGSSSWMKFDEAEKMTNLSAFDIISFSSGLNLSGLFDDPDSTAEESDRFVLAAPPDKLMERVEEIAKVEKLVVKRKKECGVELEGQEDNFGITVVVYRFTESLVLVEAQWRGRDGVNLWKNRLKPQLCAATSQETDSQVACD 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0492 427 Gene3D Phosphorylase Kinase; domain 1 8 97 - -
Prci8g0492 427 ProSiteProfiles NAF domain profile. 298 322 IPR018451 GO:0007165
Prci8g0492 427 FunFam Non-specific serine/threonine protein kinase 8 302 - -
Prci8g0492 427 Pfam Protein kinase domain 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g0492 427 Pfam NAF domain 301 359 IPR004041 GO:0007165
Prci8g0492 427 Gene3D Transferase(Phosphotransferase) domain 1 98 279 - -
Prci8g0492 427 ProSiteProfiles Protein kinase domain profile. 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g0492 427 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 10 395 - -
Prci8g0492 427 SMART serkin_6 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g0492 427 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524
Prci8g0492 427 FunFam Non-specific serine/threonine protein kinase 9 97 - -
Prci8g0492 427 Gene3D Kinase associated domain 1, KA1 299 415 - -
Prci8g0492 427 CDD CIPK_C 305 413 - -
Prci8g0492 427 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Prci8g0492 427 SUPERFAMILY Protein kinase-like (PK-like) 15 284 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0492 Prci-Chr8 3187447 3189364 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0492 1 425 CBL-interacting serine-threonine protein kinases AT2G30360 64.220 0.0 556
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Prci8g0492 Pkinase 1.9e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0492 - - qsa:O6P43_014145 629.402