Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0489 ATGTGCTTTAGTGATCATATCTCTGTCTTTGAGACCAATAAGGTTATATTGTTATCAAGTGTTTTAATGGGAAGATATGAGTTAGGAAGATTGCTAGGCCAAGGTACCTTTGCAAAAGTGTACTATGCACGAAGCATGGCAACTAATCAGAGTGTGGCTGTCAAGGTAATTGACAAAGATAAGGTTATAAAATCTGGGCAAGCTGAACACATCAAGCGTGAAATATCTATTATGAGGAAGGTTAGACATCCCTATATCATACAGCTTTTTGAGGTCATGGCCACCAAGAGTAAGATTTACTTTGTTATAGAATATGCTAAAGGCGGTGAGCTCTTCACCAAGTTGGCTAAAAAAGGGAAGCTCAAAGAGGACGCTGCACATAAATATTTCTGGCAGCTGATCAATGCAGTTGATTTTTGTCACAGCAGAGGCGTGTACCACCGAGATATTAAACCAGAGAACCTTTTGTTGGATGAGAATGGGAATCTGAAGGTTTCTGATTTTGGGTTAAGTGCTCTGGCAGAATCCAAGCGGGAAGATGGCTTGTTGCATACAACTTGTGGCACACCCGCTTACGTTGCTCCTGAAGTCATCAAAAGGAAAGGGTATGATGGTGCCAAAGCTGATATTTGGTCTTGTGGGGTAGTGTTGTTTGTATTATTGGCAGGATATCTCCCTTTTCATGATCCAAATTTGATAGAGATGTACAGGAAGATTGGCAAAGCAGAATTTGAATGTCCTAATTGGTTCTCCCCAGAAGCCCGCAAACTTTTATGCAAGATGTTAGATCCAGATCCTGATACTAGGATTTCCTTGGAAAAGATTAAGGACTGTTCTTGGTTTAAGAAAGGACCAAATTCTAAGCACAAAAAACCAGTAGTGGAAAAGAGGGCTGTCTCTTCATCAGATAAAAGTCCTTCTGATCGAAGCAATGAAGCAGAAGCAAAGCAGGAGACAGTTGTACCAATCAGTATAAATGCATTTGATATCATATCCCTTTCTGCTGGTTTTGATCTTTCTGTATTCTTTGAAGACAGTTTTAAGAAGAGAGAAGCTAGATTTACTTCAAGACAGCCTGCACCGGCTATCATCTCTAAGCTGGAAGAGACTGCAAAGCGTCTGAAGATGAAAATAAAGAAGAAAGCCGCAGGTTTGTTAAAACTAGAGGGTCTCAAGGAAGGTAGAAAGGGTGTTTTGTCCATTGATGCAGAGATCTTTGAGGTTACTCCGTATTTCCATCTGGTGGAAGTGAAAAAGTCTGATGGAGATACATTGGAATTTCAGAAAATACTGAAAGAAGGTATAAGGCCTGCCCTTCAGGATATTGTTTGGGTTTGGCAAGGTGATGACCAAGAACAGCAATCAGAACAACAACTGCAGAGACATGACCAGCAGCCACAGCAATCATAG 1410 0.4078 MCFSDHISVFETNKVILLSSVLMGRYELGRLLGQGTFAKVYYARSMATNQSVAVKVIDKDKVIKSGQAEHIKREISIMRKVRHPYIIQLFEVMATKSKIYFVIEYAKGGELFTKLAKKGKLKEDAAHKYFWQLINAVDFCHSRGVYHRDIKPENLLLDENGNLKVSDFGLSALAESKREDGLLHTTCGTPAYVAPEVIKRKGYDGAKADIWSCGVVLFVLLAGYLPFHDPNLIEMYRKIGKAEFECPNWFSPEARKLLCKMLDPDPDTRISLEKIKDCSWFKKGPNSKHKKPVVEKRAVSSSDKSPSDRSNEAEAKQETVVPISINAFDIISLSAGFDLSVFFEDSFKKREARFTSRQPAPAIISKLEETAKRLKMKIKKKAAGLLKLEGLKEGRKGVLSIDAEIFEVTPYFHLVEVKKSDGDTLEFQKILKEGIRPALQDIVWVWQGDDQEQQSEQQLQRHDQQPQQS 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0489 469 Gene3D Transferase(Phosphotransferase) domain 1 106 287 - -
Prci8g0489 469 ProSitePatterns Protein kinases ATP-binding region signature. 32 55 IPR017441 GO:0005524
Prci8g0489 469 Gene3D Kinase associated domain 1, KA1 320 445 - -
Prci8g0489 469 ProSiteProfiles Protein kinase domain profile. 26 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g0489 469 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 20 437 - -
Prci8g0489 469 CDD STKc_SnRK3 25 280 - -
Prci8g0489 469 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Prci8g0489 469 MobiDBLite consensus disorder prediction 284 316 - -
Prci8g0489 469 MobiDBLite consensus disorder prediction 291 315 - -
Prci8g0489 469 ProSiteProfiles NAF domain profile. 320 344 IPR018451 GO:0007165
Prci8g0489 469 FunFam Non-specific serine/threonine protein kinase 320 444 - -
Prci8g0489 469 Gene3D Phosphorylase Kinase; domain 1 17 105 - -
Prci8g0489 469 FunFam Non-specific serine/threonine protein kinase 18 314 - -
Prci8g0489 469 SUPERFAMILY Protein kinase-like (PK-like) 22 322 IPR011009 -
Prci8g0489 469 SMART serkin_6 26 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g0489 469 Pfam NAF domain 322 380 IPR004041 GO:0007165
Prci8g0489 469 FunFam Non-specific serine/threonine protein kinase 18 105 - -
Prci8g0489 469 Pfam Protein kinase domain 26 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g0489 469 CDD CIPK_C 326 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0489 Prci-Chr8 3168201 3170780 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0489 20 455 CBL-interacting serine-threonine protein kinases AT5G58380 66.593 0.0 627
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Prci8g0489 Pkinase 2.7e-77 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0489 - K07198 gmx:100779316 629.787