Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0465 ATGGCATCTTCTTCTGGAAGCCTCGACACCTCTGCTAACTCCCGCTCCACCTTCACTTTCTCTACGCGTTCATTCATGAACACTTCTTTTTCCGACCTTCTCGCTTCTCCGGCCGCCGCCGACATCCCCGCCTCCGCCGTCGATAAGCCTCGCGGATTTTCGGATCGTATAGCAGAGAGGACTGGGTTGGGCATGCCCAAATTCAAGTCGACCCCGCCTCCTTCGCTGCCTCTCTCTCGTCCTGCCATTTCTCCTTCTTCTTACTTCGCCATCCCTCCTGGGATGAGCCCAGCGGAGCTTCTTGACTCGCCTGTTCTCCTCAATGCGTCTAACATATTGCCATCTCCGACCACTGGAGCATTCTCTGCTCAGGCCTTCAATTGGAAGAGCAGTTCTGGGCAACAGCAGCAAAATATCAAAGAAGAAGACAAGAACTTCTCAAGCTTCTCGTTTCAACCCCAACCCAGGGCTCCTCTTCCATCCACCACAACGTTTCCATCTTCAGCTGCCTCGAATCAAAATCAACAGGCATGGAGTTTTCAGGAAGCCACCAAGCAAGATAACTTCTCTTCAGGAAAGACCATAGTGAAAGCCGAGAACGCTTCAATACAGAGCTATTCCACTGAGATGGTCAGCAATGTCCAGACAAACCATAACAGTGGGTTTCAATCGGATCATAGCAATTACCACCCACAACCTCAGACCTTAAGCAGAAGATCAGATGATGGATACAACTGGAGAAAATATGGGCAGAAGCAAGTGAAAGGAAGCGAGAATCCTAGAAGCTATTACAAATGCACATATCCTAGTTGCCCAACGAAGAAGAAGGTTGAGAGATCTTTGGACGGGCAAATTACAGAGATAGTTTACAAGGGAACACATAACCATCCCAAGCCTCAGGCAACTAGGAGAAACTCATCAAATGCATCTTCTCTCGCCATTATTCCTGCTACAAATTCTGTGACCGCTGAAATGCAAGATCAGTCATTTGCCAGCCATGGTAATGGACAAATGGATTCAGCTGCAACACCAGAGAACTCGTCCATATCGATGGGAGATGATGATTTTGAGCAGACTTCCCAGAGGACTAGATCAGGAGATGAGTTTGATGAAGACGAATCTGATGCCAAAAGATGGAAAATGGAAGGTGAAAATGAGGGTGTATCGGCAGCTGGAAGTAGAACAGTGAGAGAACCCAGAGTTGTAGTCCAGACAACCAGTGACATAGATATTCTAGACGATGGGTACAGATGGAGAAAATACGGGCAAAAAGTAGTGAAGGGAAATCCAAATCCAAGGAGCTACTACAAATGCACACACCCAGGATGTCCAGTGAGGAAGCACGTAGAGAGAGCCTCACACGACCTGAGAGCAGTGATCACAACCTACGAGGGAAAGCATAACCATGATGTCCCTGCGGCCAGAGGGAGCGGCAGCCATTCCGCGAACAGGCCTCCGTTGAACAATTCCACAAACAGCAACGGTGCAATCCCCACAGCCATAAGGCCATCGGCCATCGCACACAACGCCAACAATTCAATGAACAACGGTGGTATTCAGAATTACAGGGCAGCAGCGTCAGGACCAGAAGGTCAATCATCATCGCTTGCCCTAGGGATGATTCAGGGCCCAGGAAGCTTCGGGTTTTCGGGGTTCGGGAATCCGATGGGGTCTTTCATGAACCATAGCAATATTCAGCAGCAACCACAATCGGAGAACGGGTTTTCTTCCAGGGCCAAGGAGGAGCCCAGGGACGACGTGTTTCTGGAATCTTTACTGTGCTGA 1785 0.493 MASSSGSLDTSANSRSTFTFSTRSFMNTSFSDLLASPAAADIPASAVDKPRGFSDRIAERTGLGMPKFKSTPPPSLPLSRPAISPSSYFAIPPGMSPAELLDSPVLLNASNILPSPTTGAFSAQAFNWKSSSGQQQQNIKEEDKNFSSFSFQPQPRAPLPSTTTFPSSAASNQNQQAWSFQEATKQDNFSSGKTIVKAENASIQSYSTEMVSNVQTNHNSGFQSDHSNYHPQPQTLSRRSDDGYNWRKYGQKQVKGSENPRSYYKCTYPSCPTKKKVERSLDGQITEIVYKGTHNHPKPQATRRNSSNASSLAIIPATNSVTAEMQDQSFASHGNGQMDSAATPENSSISMGDDDFEQTSQRTRSGDEFDEDESDAKRWKMEGENEGVSAAGSRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGSHSANRPPLNNSTNSNGAIPTAIRPSAIAHNANNSMNNGGIQNYRAAASGPEGQSSSLALGMIQGPGSFGFSGFGNPMGSFMNHSNIQQQPQSENGFSSRAKEEPRDDVFLESLLC 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0465 594 Pfam WRKY DNA -binding domain 241 297 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci8g0465 594 Pfam WRKY DNA -binding domain 413 469 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci8g0465 594 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 101 496 IPR044810 GO:0003700
Prci8g0465 594 MobiDBLite consensus disorder prediction 290 311 - -
Prci8g0465 594 Gene3D WRKY domain 227 300 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci8g0465 594 MobiDBLite consensus disorder prediction 481 498 - -
Prci8g0465 594 MobiDBLite consensus disorder prediction 59 79 - -
Prci8g0465 594 MobiDBLite consensus disorder prediction 357 384 - -
Prci8g0465 594 MobiDBLite consensus disorder prediction 216 244 - -
Prci8g0465 594 FunFam WRKY transcription factor 230 300 - -
Prci8g0465 594 MobiDBLite consensus disorder prediction 331 393 - -
Prci8g0465 594 MobiDBLite consensus disorder prediction 128 179 - -
Prci8g0465 594 MobiDBLite consensus disorder prediction 559 576 - -
Prci8g0465 594 SMART WRKY_cls 240 298 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci8g0465 594 SMART WRKY_cls 412 471 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci8g0465 594 MobiDBLite consensus disorder prediction 559 586 - -
Prci8g0465 594 MobiDBLite consensus disorder prediction 331 356 - -
Prci8g0465 594 SUPERFAMILY WRKY DNA-binding domain 239 299 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci8g0465 594 Gene3D WRKY domain 399 465 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci8g0465 594 MobiDBLite consensus disorder prediction 216 240 - -
Prci8g0465 594 SUPERFAMILY WRKY DNA-binding domain 404 472 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci8g0465 594 MobiDBLite consensus disorder prediction 465 498 - -
Prci8g0465 594 ProSiteProfiles WRKY domain profile. 407 472 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci8g0465 594 ProSiteProfiles WRKY domain profile. 241 299 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci8g0465 594 FunFam WRKY transcription factor 33 399 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0465 Prci-Chr8 2975545 2978525 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0465 63 593 WRKY Transcription Factor Family AT2G38470 46.182 4.40e-117 356
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci8g0465 WRKY 1.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0465 K13424 - gmx:100127393 797.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci8g0465 8 2975545 2978525 Prci8g0465 8 2975545 2978525 ECH