Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0464 ATGGCATCTTCTTCTGGAAGCCTCGACACCTCTGCTAACTCCCGCTCCACCTTCACTTTCTCTACGCGTTCATTCATGAACACTTCTTTTTCCGACCTTCTCGCTTCTCCGGCCGCCGCCGACATCCCCGCCTCCGCCGTCGATAAGCCTCGCGGATTTTCGGATCGTATAGCAGAGAGGACTGGGTTGGGCATGCCCAAATTCAAGTCGACCCCGCCTCCTTCGCTGCCTCTCTCTCGTCCTGCCATTTCTCCTTCTTCTTACTTCGCCATCCCTCCTGGGATGAGCCCAGCGGAGCTTCTTGACTCGCCTGTTCTCCTCAATGCGTCTAACATATTGCCATCTCCGACCACTGGAGCATTCTCTGCTCAGGCCTTCAATTGGAAGAGCAGTTCTGGGCAACAGCAGCAAAATATCAAAGAAGAAGACAAGAACTTCTCAAGCTTCTCGTTTCAACCCCAACCCAGGGCTCCTCTTCCATCCACCACAACGTTTCCATCTTCAGCTGCCTCGAATCAAAATGCATGGAGTTTTCAGGAAGCCACCAAGCAAGATAACTTCTCTTCAGGAAAGACCATAGTGAAAGCCGAGAACGCTTCAATACAGAGCTATTCCACTGAGATGGTCAGCAATGTCCAGACAAACCATAACAGTGGGTTTCAATCGGATCATAGCAATTACCACCCACAACCTCAGACCTTAAGCAGAAGATCAGATGATGGATACAACTGGAGAAAATATGGGCAGAAGCAAGTGAAAGGAAGCGAGAATCCTAGAAGCTATTACAAATGCACATATCCTAGTTGCCCAACGAAGAAGAAGGTTGAGAGATCTTTGGACGGGCAAATTACAGAGATAGTTTACAAGGGAACACATAACCATCCCAAGCCTCAGGCAACTAGGAGAAACTCATCAAATGCATCTTCTCTCGCCATTATTCCTGCTACAAATTCTGTGACCGCTGAAATGCAAGATCAGTCATTTGCCAGCCATGGTAATGGACAAATGGATTCAGCTGCAACACCAGAGAACTCGTCCATATCGATGGGAGATGATGATTTTGAGCAGACTTCCCAGAGGACTAGATCAGGAGATGAGTTTGATGAAGACGAATCTGATGCCAAAAGATGGAAAATGGAAGGTGAAAATGAGGGTGTATCGGCAGCTGGAAGTAGAACAGTGAGAGAACCCAGAGTTGTAGTCCAGACAACCAGTGACATAGATATTCTAGACGATGGGTACAGATGGAGAAAATACGGGCAAAAAGTAGTGAAGGGAAATCCAAATCCAAGGAGCTACTACAAATGCACACACCCAGGATGTCCAGTGAGGAAGCACGTAGAGAGAGCCTCACACGACCTGAGAGCAGTGATCACAACCTACGAGGGAAAGCATAACCATGATGTCCCTGCGGCCAGAGGGAGCGGCAGCCATTCCGCGAACAGGCCTCCGTTGAACAATTCCACAAACAGCAACGGTGCAATCCCCACAGCCATAAGGCCATCGGCCATCGCACACAACGCCAACAATTCAATGAACAACGGTGGTATTCAGAATTACAGGGCAGCAGCGTCAGGACCAGAAGGTCAATCATCATCGCTTGCCCTAGGGATGATTCAGGGCCCAGGAAGCTTCGGGTTTTCGGGGTTCGGGAATCCGATGGGGTCTTTCATGAACCATAGCAATATTCAGCAGCAACCACAATCGGAGAACGGGTTTTCTTCCAGGGCCAAGGAGGAGCCCAGGGACGACGTGTTTCTGGAATCTTTACTGTGCTGA 1779 0.493 MASSSGSLDTSANSRSTFTFSTRSFMNTSFSDLLASPAAADIPASAVDKPRGFSDRIAERTGLGMPKFKSTPPPSLPLSRPAISPSSYFAIPPGMSPAELLDSPVLLNASNILPSPTTGAFSAQAFNWKSSSGQQQQNIKEEDKNFSSFSFQPQPRAPLPSTTTFPSSAASNQNAWSFQEATKQDNFSSGKTIVKAENASIQSYSTEMVSNVQTNHNSGFQSDHSNYHPQPQTLSRRSDDGYNWRKYGQKQVKGSENPRSYYKCTYPSCPTKKKVERSLDGQITEIVYKGTHNHPKPQATRRNSSNASSLAIIPATNSVTAEMQDQSFASHGNGQMDSAATPENSSISMGDDDFEQTSQRTRSGDEFDEDESDAKRWKMEGENEGVSAAGSRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGSHSANRPPLNNSTNSNGAIPTAIRPSAIAHNANNSMNNGGIQNYRAAASGPEGQSSSLALGMIQGPGSFGFSGFGNPMGSFMNHSNIQQQPQSENGFSSRAKEEPRDDVFLESLLC 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0464 592 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 101 497 IPR044810 GO:0003700
Prci8g0464 592 MobiDBLite consensus disorder prediction 329 391 - -
Prci8g0464 592 MobiDBLite consensus disorder prediction 557 574 - -
Prci8g0464 592 MobiDBLite consensus disorder prediction 329 354 - -
Prci8g0464 592 MobiDBLite consensus disorder prediction 557 584 - -
Prci8g0464 592 MobiDBLite consensus disorder prediction 59 79 - -
Prci8g0464 592 ProSiteProfiles WRKY domain profile. 405 470 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci8g0464 592 MobiDBLite consensus disorder prediction 214 238 - -
Prci8g0464 592 FunFam WRKY transcription factor 33 397 463 - -
Prci8g0464 592 Pfam WRKY DNA -binding domain 411 467 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci8g0464 592 Pfam WRKY DNA -binding domain 239 295 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci8g0464 592 MobiDBLite consensus disorder prediction 463 496 - -
Prci8g0464 592 MobiDBLite consensus disorder prediction 288 309 - -
Prci8g0464 592 ProSiteProfiles WRKY domain profile. 239 297 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci8g0464 592 Gene3D WRKY domain 397 463 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci8g0464 592 SUPERFAMILY WRKY DNA-binding domain 237 297 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci8g0464 592 Gene3D WRKY domain 225 298 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci8g0464 592 SMART WRKY_cls 238 296 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci8g0464 592 SMART WRKY_cls 410 469 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci8g0464 592 MobiDBLite consensus disorder prediction 355 382 - -
Prci8g0464 592 MobiDBLite consensus disorder prediction 128 172 - -
Prci8g0464 592 FunFam WRKY transcription factor 228 298 - -
Prci8g0464 592 SUPERFAMILY WRKY DNA-binding domain 402 470 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci8g0464 592 MobiDBLite consensus disorder prediction 479 496 - -
Prci8g0464 592 MobiDBLite consensus disorder prediction 214 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0464 Prci-Chr8 2975545 2978526 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0464 63 591 WRKY Transcription Factor Family AT2G38470 46.364 9.00e-118 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci8g0464 WRKY 1.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0464 K13424 - qsa:O6P43_014117 793.882