Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0454 ATGGCTTCGGCTTCAATTCGAAATTTCCTAATGCAGCCTAAGCTATGGAGGCTTGTGGGTTCCGTGTCGGGTCTTGTTGGGCTGCTCTGTTTTCCTCTGAGTTCGTCTTTCGAACTCTTACTCGGACATCGGAATTTTCATACGATGTCTCTCTATGCTGCGATCAGTGCCATCATCTTGGGCTTCATGCTGTGGGCATACAAGTGGCAACTTCCCAGGAATCTCTTGTTCAAAGCCCATGTGGGTTTCTTAGTTCTGATGTTAACCTCTTTGTTCTCCTTTTTCTCCAATGGAAAACTTGACTCAGACCCATTAAGCTTGATTTCTTGTGTTTCCTTTGCTGTGGCGTCTCTGAGCTTGTCCATACAGATTGACCTTGGCTTTGAAACTGAATTGTTCAACTTTATTCTGGGTTTAGTCATATTTTTACTCATGACGAGGAACCTGTTGCTCGCTTTTATCGGAATGCCCATCTGTTATGTGCTCGTGCTTCTTCATTCTTATATGGATTCCCAGCGTCAATCCCTACTGCATTCTGAGAATGTTAGCATCAATGATCATGTGGCCCTTGGAATCGATGTGGACGAAGCTGGAGCTGGAGCTGACAATAACAGTGAGAATTGCTATTACACCATTGAGGAGAGACTTCAATTTCCGGCTAACATTGAAGATAAACTGAAGGACAAAGTGGCTGCTGGCTTTGCGAATGAGTGCTGTCACGTCTTCATTGGTTGGCGAAGACAGTTATTGAACGACAAGCTTTCGAGAATTCGGATACAGAAGCTGAACCTGGACGAGATCGACAAGGTGCCGTTGAATTTCCTCGAGGACAAGATCAAACGTTGGAACACGATTTCCTACTACGTTCTAAGGACACTACTCCCGGACGAACGGAATCTCTGCAAGCGATTATTCTCCGAATTCCCATATTGTGAGGTTTTCTGTTTCAATGAATTATGTCAAGAACCCATGATTCAATTACTCAACTTCGCGGATGCCATCGCCGCCGGGAAGGGATCGCCAGAGCGATTGTTCAGAATACTCGGCATGTTTGAGATACTGAACCAGTTATTACCGGACTTTGATTCTTTATTCTCCGATCAGTGCTGTGTCTTTCTCAAGGATAGGGCCGTCAAAATCTGGAGAAGGTTCGGGAAGGAAATCAAAGGAGTTTTCGTGGACTTGGAGAATCTTATTTTTCAGGAACAAGAAAAGGTGGTTCCTTCCCATGGTGGGCTTCATCCCTTGACCCACTATATAATGAACTACCTTAGTCTCGCATGTAAATCATGGCGAACCGTTGAACGTGCTTTTAGAGACAGCGAGAATCCTTTGAGAAGTCACTTGGAAATCGGAAACGAAGAGTCGTCGCCTTCTCCATTTTCCCTCCAGGTGAGTCTAATCATGGATTTGTTAGACAAAAGTTTAAAGAAAATATCGGAAAAGTACGAGGACCCTGTTTTACGCTCTCTTTTCATGATAAACAATGTGAGGTACATTGTTCAGAAAGCAAAACGTAGTGAAGTAGGGAGGCTAGCGGGCGAAGATTGGATCAAAGATCGTGTTTCTAGGGTTGGTGATTATATTGTACAGTTCAAGGAGTCATGGGGTGGTAATGTGGTTGAGATGTTCAGAACAGGGTCCGTGAGACCTGAAGCAGAGAAATTGAAGCTGTTTAGTATTCAACTTGAGAGGATATGTGAGGAGCAATCGAAATGGGTTGTGTTCGATGAGCACCTGGGAGAGAGGATCAGAAGTTCCTTGAGGAAAAAATTGCTACCAAAATATGAACATTTCTTGGCTAGATTCGACAATGTTGTTGATAGAGAAAGTGAGGGTGGTCTAATGATGCAGGAAGATATTGTGGCTGGAATCAACAAGCTGTTCAAGGGAAAAGATGAGCTCAAAAACTTGAGGAATATTCAACCAGCATGGACCACAGTGAAACCGACAAAGGATGATTCTTACGAATGGACAAAGCGTGGCCAGGAGGCAGCTCTTAATTCTAGACATACCAGATATCACTACTGGTGCGTGAACAAGTTTACAAGAGGCTGTCAAGCAATTAAAGAGGAGGTACAACAAAAAGGGGAGAAACCAGCAATGCATGAGACTAGATACGTTGGCTTCCACACGTGCAGAATGAATCGCAGCAATGATGAGTCCGACCTTTGA 2175 0.4405 MASASIRNFLMQPKLWRLVGSVSGLVGLLCFPLSSSFELLLGHRNFHTMSLYAAISAIILGFMLWAYKWQLPRNLLFKAHVGFLVLMLTSLFSFFSNGKLDSDPLSLISCVSFAVASLSLSIQIDLGFETELFNFILGLVIFLLMTRNLLLAFIGMPICYVLVLLHSYMDSQRQSLLHSENVSINDHVALGIDVDEAGAGADNNSENCYYTIEERLQFPANIEDKLKDKVAAGFANECCHVFIGWRRQLLNDKLSRIRIQKLNLDEIDKVPLNFLEDKIKRWNTISYYVLRTLLPDERNLCKRLFSEFPYCEVFCFNELCQEPMIQLLNFADAIAAGKGSPERLFRILGMFEILNQLLPDFDSLFSDQCCVFLKDRAVKIWRRFGKEIKGVFVDLENLIFQEQEKVVPSHGGLHPLTHYIMNYLSLACKSWRTVERAFRDSENPLRSHLEIGNEESSPSPFSLQVSLIMDLLDKSLKKISEKYEDPVLRSLFMINNVRYIVQKAKRSEVGRLAGEDWIKDRVSRVGDYIVQFKESWGGNVVEMFRTGSVRPEAEKLKLFSIQLERICEEQSKWVVFDEHLGERIRSSLRKKLLPKYEHFLARFDNVVDRESEGGLMMQEDIVAGINKLFKGKDELKNLRNIQPAWTTVKPTKDDSYEWTKRGQEAALNSRHTRYHYWCVNKFTRGCQAIKEEVQQKGEKPAMHETRYVGFHTCRMNRSNDESDL 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0454 724 SMART WRKY_cls 652 715 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci8g0454 724 SUPERFAMILY Cullin repeat-like 231 606 IPR016159 -
Prci8g0454 724 PANTHER EXOCYST COMPLEX PROTEIN EXO70 226 630 IPR004140 GO:0000145|GO:0006887
Prci8g0454 724 Gene3D Exocyst complex component Exo70 194 638 - -
Prci8g0454 724 Gene3D WRKY domain 642 715 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci8g0454 724 ProSiteProfiles WRKY domain profile. 647 711 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci8g0454 724 SUPERFAMILY WRKY DNA-binding domain 650 715 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci8g0454 724 Pfam Exo70 exocyst complex subunit 281 606 IPR046364 GO:0000145|GO:0005546|GO:0006887
Prci8g0454 724 Pfam WRKY DNA -binding domain 653 714 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0454 Prci-Chr8 2932104 2934795 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0454 221 631 EXO70 exocyst subunit family AT5G58430 40.995 2.09e-99 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci8g0454 Exo70 2.5e-74 CL0295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0454 K07195 - pcin:129318330 1450.65