Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0442 ATGTCCAAGGTTGTCTGTGTCACCGGAGCCAGCGGCGCCATCGGATCATGGGTCGTCCGCCTCCTCCTCGAACGCGGCTACACCGTCCATGCCACCGTCCAAGATCTCAACGATGACAATGAGACGAAGCATTTGGAGGCGATGGAAGGAGCGAAGAGTCGACTGCATCTGTTCGAGATGGATCTTCTGGACATGGACTCCATCAAGGCCGCCGTGGAGGGCTGCGCGGGCGTGTTCCACCTGGCGTGTCCGAACATCATCGGTCAAGTTCAGGATCCAGAGAAGCAGATAGTGGAGCCGGCGACGAAAGGGACGGTGAACGTGCTGAAGGCAGCTAAAGAAGCCGGGGTGGAGAGAGTGGTGGCAACGTCGTCGATATCGTCGATCATGCCGAGTCCCGGCTGGCCTTCCGACAGGATCAAAGATGAGGAATGCTGGACCGACCTTGACTACTGCAAGCGCAAGGGACTGTGGTATCCGATAGCAAAAACGCTGGCGGAGAAAGCTGGGTGGCAATTTGCTAAGGAGACGGGCTGCGACGTCGTTATGATAAATCCGGGCACCGCCTTAGGCCCTCTCATCCCCTCAAGAGTCAATGCAAGCATGGCCGTCCTTCTTGGTGTTCTCAAAGGGGACACTGAGACCTACGAGGACTTCTTCATGGGCATGGCGCACTTTAAGGATGTCGCCATGGCTCATGTCTTGGCCTTCGAGAAGAAAGAGGCTTCTGGAAGGCACTTGTGCGTGGAAGCCATTCGTCACTACGGTGATTTTGTGGAAAAAGTGGCTGAATTGTACCCTGACTATAATGTGGCCAAGGTGCCCCAGGACACTCAGCCTGGCTTGCTCCGAGCCAAGGATGCTTCTAAGAAGTTAATTAATCTAGGGATGACGTTCACCCCCATTGAGCAAATCATCACCGATGCTGTTGAAAGCTTGAAGAGCAAGGGCTTTCTCTGA 960 0.549 MSKVVCVTGASGAIGSWVVRLLLERGYTVHATVQDLNDDNETKHLEAMEGAKSRLHLFEMDLLDMDSIKAAVEGCAGVFHLACPNIIGQVQDPEKQIVEPATKGTVNVLKAAKEAGVERVVATSSISSIMPSPGWPSDRIKDEECWTDLDYCKRKGLWYPIAKTLAEKAGWQFAKETGCDVVMINPGTALGPLIPSRVNASMAVLLGVLKGDTETYEDFFMGMAHFKDVAMAHVLAFEKKEASGRHLCVEAIRHYGDFVEKVAELYPDYNVAKVPQDTQPGLLRAKDASKKLINLGMTFTPIEQIITDAVESLKSKGFL 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0442 319 FunFam Cinnamoyl-CoA reductase 1 1 319 - -
Prci8g0442 319 Pfam NAD dependent epimerase/dehydratase family 5 242 IPR001509 -
Prci8g0442 319 Gene3D - 1 319 - -
Prci8g0442 319 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 313 IPR036291 -
Prci8g0442 319 CDD FR_SDR_e 5 296 - -
Prci8g0442 319 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 3 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0442 Prci-Chr8 2863286 2865583 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0442 3 319 Monolignol Biosynthesis Gene Families AT5G58490 67.192 2.93e-169 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0442 - - gmx:100806281 540.806