Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0441 ATGGAATACAATTCACTGCTGCGAAGCCCAAAGAAAGAGGAGCACCAAGTACCCGATGCTGTCCTCCCCAGATTACCGGATTCTGCCATAGCTTATTCCTACGATGATTTCGATATTTTGGATGAACTGGGCGACGGCGTTTTAGCCTGTTCTGAACATGACGACAGAAAATTACCACGACACCAATGTTATGGTGATCGGCTTAATTGGGACTTCTTGGAATTGGAGGGATTCTCAACTGCTGATACGGAGGAAGCAGAAGTAGCAGACGATGATGATGGAGGGGACGACGAAGAAGAAGAGAAGATGCAGGTGAGAAGCAAATGCCTTCTGGAAAACGAGAAGATAATAAAGAGAGAAAATATTGATTTTTGGGAGGAAGAAGATGAGAAGACGACGTCTCTGAAATTGAACTTGAACTATCAAGAGGTCTTGGATGCATGGTCTGACCGGGGCTCTCTCTGGGCCAACGATTTTTCTCTTTCAATGGCTTCCAACATGGGAGAGGTTCCAATACTTCAGGAAGATAGAAGCAGAAGGAATGCAAGCGTTCTGAGGTACAAAGAGAAGCGCCAAAGCAGATTATTCTCGAAGAAGATAAGATACCAAGTCCGAAAGCTAAATGCTGATAAAAGACCCAGAGTCAAGGGTCGGTTTGTGAAGAGACTTTAA 672 0.4464 MEYNSLLRSPKKEEHQVPDAVLPRLPDSAIAYSYDDFDILDELGDGVLACSEHDDRKLPRHQCYGDRLNWDFLELEGFSTADTEEAEVADDDDGGDDEEEEKMQVRSKCLLENEKIIKRENIDFWEEEDEKTTSLKLNLNYQEVLDAWSDRGSLWANDFSLSMASNMGEVPILQEDRSRRNASVLRYKEKRQSRLFSKKIRYQVRKLNADKRPRVKGRFVKRL 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0441 223 MobiDBLite consensus disorder prediction 81 102 - -
Prci8g0441 223 ProSiteProfiles CCT domain profile. 180 222 IPR010402 GO:0005515
Prci8g0441 223 Pfam CCT motif 180 222 IPR010402 GO:0005515
Prci8g0441 223 MobiDBLite consensus disorder prediction 1 20 - -
Prci8g0441 223 MobiDBLite consensus disorder prediction 81 99 - -
Prci8g0441 223 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 85 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0441 Prci-Chr8 2850031 2852279 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0441 127 222 C2C2-CO-like Transcription Factor Family AT1G25440 44.538 1.46e-20 87.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Prci8g0441 CCT 1e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0441 - - gmx:100803772 239.195