Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0440 ATGGAATACAATTCACTGCTGCGAAGCCCAAAGAAAGAGGAGCACCAAGTACCCGATGCTGTCCTCCCCAGATTACCGGATTCTGCCATAGCTTATTCCTACGATGATTTCGATATTTTGGATGAACTGGGCGACGGCGTTTTAGCCTGTTCTGAACATGACGACAGAAAATTACCACGACACCAATGTTATGGTGATCGGCTTAATTGGGACTTCTTGGAATTGGAGGGATTCTCAACTGCTGATACGGAGGAAGCAGAAGTAGCAGACGATGATGATGGAGGGGACGACGAAGAAGAAGAGAAGATGCAGGTGAGAAGCAAATGCCTTCTGGAAAACGAGAAGATAATAAAGAGAGAAAATATTGATTTTTGGGAGGAAGAAGATGAGAAGACGACGTCTCTGAAATTGAACTTGAACTATCAAGAGGTCTTGGATGCATGGTCTGACCGGGGCTCTCTCTGGGCCAACGATTTTTCTCTTTCAATGGCTTCCAACATGGGAGAGGTTCCAATACTTCAGGAAGATAGAAGCAGAAGGAATGCAAGCGTTCTGAGGTACAAAGAGAAGCGCCAAAGCAGATTATTCTCGAAGAAGATAAGATACCAAGTCCGAAAGCTAAATGCTGATAAAAGACCCAGAGTCAAGGTCAGTTTTATTCTTGAGAAGATTACATTGAAGTAA 684 0.4386 MEYNSLLRSPKKEEHQVPDAVLPRLPDSAIAYSYDDFDILDELGDGVLACSEHDDRKLPRHQCYGDRLNWDFLELEGFSTADTEEAEVADDDDGGDDEEEEKMQVRSKCLLENEKIIKRENIDFWEEEDEKTTSLKLNLNYQEVLDAWSDRGSLWANDFSLSMASNMGEVPILQEDRSRRNASVLRYKEKRQSRLFSKKIRYQVRKLNADKRPRVKVSFILEKITLK 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0440 227 MobiDBLite consensus disorder prediction 81 102 - -
Prci8g0440 227 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 85 221 - -
Prci8g0440 227 Pfam CCT motif 180 220 IPR010402 GO:0005515
Prci8g0440 227 MobiDBLite consensus disorder prediction 1 20 - -
Prci8g0440 227 MobiDBLite consensus disorder prediction 81 99 - -
Prci8g0440 227 ProSiteProfiles CCT domain profile. 180 222 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0440 Prci-Chr8 2850031 2852308 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0440 127 220 C2C2-CO-like Transcription Factor Family AT1G25440 41.026 2.86e-17 78.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Prci8g0440 CCT 1.9e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0440 - - gmx:100803772 227.639