Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0423 ATGGAAGAAGGGTTGGTGATGTTAATGTTGATGCTATGTTTGCTTCCTTCGAGTTTTAGCAGCTCTTCTTCTTCCCCTCAAAACAGAGAAGGTCTGGCGCTGTTAATGTTGAAGAACAGAGTGGTGAGAGACCCTTTTGGAGCTCTATCCAACTGGAATGGCGAAGACGTCCACATTGATCCCTGTTCATGGTTTGGAGTGGAATGCTCTGTCCAAGGCAAAGTCGTTTCCTTGAATTTGAAGGACCTTTGTCTTAAAGGAACTCTAGCCCCTGAAATTGGGAAGCTGGCTCACATAAAATCTATCATTTTGCGCAACAATTCTTTTTCTGGTGAGATTCCTGAAGAGATATCTCAACTGGAGGAACTGGAAGTTCTTGACTTGGCATATAACAATTTCAAAGGATCATTCCCATCTGACCCTGGCAGCAATCCCTCCCTCACGACCCTGCACACAGGCCAACAAAATGGGGATGTGCCATACAAGAGGAAACTTCTTCATAGATTAAAAGCAAGAAGACAAAGAGATGATAACAAAGAGTCTGCTTCACCGTCATCCTCACCTTTCCCCTCTTCATTACCACCAGATTCTGAGCCTTTCCCGCCATCAGAACCACCCTTAAATCCACTATCTGCATTAACTCCATCACCATATTTACTCTCGCCTTTAAGGTCCCCAGAAGTTTCCCCTTCACAATCTCCATCCTTTATTTTTCTCACGCCTTCATTTTCACCAGTGGCGACACCAGCCATGGGAATATCACTACCAGCAAATTCACCTACAGTTGTGTCCTCTCCACCACTGTCCAATTGGATTTCAGCGCCTACCCCTGCTTCATTTAGGGACCAAGGGAACACAAAAAGTTTCAAGCCCCAGAAATCTTTGATCATTTGGTCAACAGCTGGGGGTGTATCCTTACTTGTTGTTGTGTCAGCCATTGCTTTCGCTTGCTTCCGAACTAGCAGGGTTGTAACTGTGAAACCTTGGTCAACAGGATTAAGTGGGCAGCTACAGAAAGCTTTTGTAACAGGTGTGCCAAATCTCAGACGAGCAGAGATTGAAGCAGCTTGTGAAGGTTTTAGCAACATTATTGGTTCTATTCCAGAGGGGACTGTTTATAAGGGCACTCTTTCCAGTGGAGTTGAGATAGCTGTAGTAACTACTGCAGTGACCTCATCTAAAAATTGGCCTAAAACAATGGAAGCTCAATTTAGAAGAAAGATAGAGACCTTATCCAAAGTAAACCACAAGAACTTTGTGAATCTTATTGGGTATTGTGAAGAGAAGAAGCCATTCACGAGAATGATGGTCTTTGAGTATGCTCCAAATGGAACCCTCTATGAACATCTACAGATAAGAGAAGCAGAGCAGCTAGACTGGGGAATGAGAATGAGGATAGCTATGGGAGTAGCTTATTGTCTAGAGCATATGCATCAGCTGGAACCACCCATTGCCGTCAAAAACCTGCAATCTTCATCTATATACCTCACTGAAGATAATGCTGCTCAAGTATCAGATCTTATTTTCTGGAATGACATTGCCGCTGCTACAAAGAAAGGTTTCGCAGCCACAGAGCCCTTGGAAACACCATCAGCACGTAGAAAGGAAAATGTATATAGCTTTGGTATTATACTGTATGAGTTGATCACCGGAAGAATTCCCCATCTCGTGGAAATTGGCTTTCCCTCACAGTATCTAACAATGGGCCAATCCTTGAGAGAAATGGTGGATCCAACTCTGAACTCTGTGCAAGCAGAAGAGGTTGAGAAATGGTGGGGAGTGATAAAAGAATGTTTGCATTCAAATCCAGAGAAAAGGCCAACTATGAGACAGGTCGCCTCTGAGTTGAAGGAAATAACAAGAATGGGACCTGATGGAGCAACTCCAAAATCTTCCCCTCTTTGGTGGGCAGAACTCGAAATTATGTCCACGGATTCTGCCCAAAATTATCCATGA 1956 0.4381 MEEGLVMLMLMLCLLPSSFSSSSSSPQNREGLALLMLKNRVVRDPFGALSNWNGEDVHIDPCSWFGVECSVQGKVVSLNLKDLCLKGTLAPEIGKLAHIKSIILRNNSFSGEIPEEISQLEELEVLDLAYNNFKGSFPSDPGSNPSLTTLHTGQQNGDVPYKRKLLHRLKARRQRDDNKESASPSSSPFPSSLPPDSEPFPPSEPPLNPLSALTPSPYLLSPLRSPEVSPSQSPSFIFLTPSFSPVATPAMGISLPANSPTVVSSPPLSNWISAPTPASFRDQGNTKSFKPQKSLIIWSTAGGVSLLVVVSAIAFACFRTSRVVTVKPWSTGLSGQLQKAFVTGVPNLRRAEIEAACEGFSNIIGSIPEGTVYKGTLSSGVEIAVVTTAVTSSKNWPKTMEAQFRRKIETLSKVNHKNFVNLIGYCEEKKPFTRMMVFEYAPNGTLYEHLQIREAEQLDWGMRMRIAMGVAYCLEHMHQLEPPIAVKNLQSSSIYLTEDNAAQVSDLIFWNDIAAATKKGFAATEPLETPSARRKENVYSFGIILYELITGRIPHLVEIGFPSQYLTMGQSLREMVDPTLNSVQAEEVEKWWGVIKECLHSNPEKRPTMRQVASELKEITRMGPDGATPKSSPLWWAELEIMSTDSAQNYP 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0423 651 MobiDBLite consensus disorder prediction 137 156 - -
Prci8g0423 651 ProSiteProfiles Protein kinase domain profile. 358 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g0423 651 Gene3D Ribonuclease Inhibitor 27 171 IPR032675 -
Prci8g0423 651 MobiDBLite consensus disorder prediction 137 213 - -
Prci8g0423 651 FunFam Inactive receptor-like serine/threonine-protein kinase 332 440 - -
Prci8g0423 651 FunFam Nuclear pore complex protein NUP107 27 177 - -
Prci8g0423 651 Pfam Protein tyrosine and serine/threonine kinase 362 616 IPR001245 GO:0004672|GO:0006468
Prci8g0423 651 Gene3D Phosphorylase Kinase; domain 1 334 440 - -
Prci8g0423 651 PANTHER PROTEIN MALE DISCOVERER 2 6 644 - -
Prci8g0423 651 Pfam Leucine rich repeat N-terminal domain 28 70 IPR013210 -
Prci8g0423 651 SUPERFAMILY L domain-like 31 153 - -
Prci8g0423 651 Gene3D Transferase(Phosphotransferase) domain 1 442 623 - -
Prci8g0423 651 MobiDBLite consensus disorder prediction 188 212 - -
Prci8g0423 651 SUPERFAMILY Protein kinase-like (PK-like) 345 616 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0423 Prci-Chr8 2721777 2725883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0423 8 551 Receptor kinase-like Gene Family AT2G23950 29.843 4.92e-50 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Prci8g0423 PK_Tyr_Ser-Thr 1.7e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0423 - - gmx:100814122 748.429