Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0415 ATGGCAACAACAACGGCTAGTTTTTTGTGCTTCTTGCTTGCGTTGGCCTCTTTCTTGTGCCGTGTTGAGTCCTTGTCGGAGATCGGAGCCTTAACGGCTTTCAAGCTTAGCCTCCACGACCCTCTCGGCTCCTTGGACGGCTGGGATCCCTCCACGCCTTCCGCTCCTTGTGACTGGCGTGGCGTCTCGTGTTCCAACAACCGAGTCCGCGAGCTTCGCTTGCCTCGCCTTCAACTAGCTGGCCCGCTCTCGGATTCCCTCTCCAACTTGCCGCAACTTCGCAAGTTAAGCCTTCATTCTAACAACTTCAATGGCTCCATTCCTCCTTCTCTCTCCCAGTGCTTGCTTCTGCGTTCCGTTTATCTTCATAATAACTCTCTTTCCGGCAAACTCCCCCCGGCTCTTCTCAACCTCACCAACCTTCAAATCCTCGATGTTGCTCACAACTCTCTTTCGGGCCGAATCCTCGGAGATTTTTCGAACTCTCTTCTGTTCCTTGATTTGTCATCGAATGCATTTTCCGGTGATATTCCGGCGAATGTTTCGTCAAAATCTCAGCTACGACTCATCAACTTGTCCTACAATCGGTTCTCTGGCAGAATACCAGGCACTGTTGGAGTTCTGGGACTGCTTGAGTATCTTTGGCTGGACTCCAACCAGTTGTATGGGACTTTGCCTTCGGCTCTAGTTAACTGCTCTTCTCTTGTGCACCTAAGCGCCGAAAACAATGCGCTTTCCGGTTTGATTCCGTCGACTATAGGGACGATGCCGAGACTTCAAGTGCTGTCGTTATCGTCGAATCAACTTTCGGGATCGGTCCCCACTTCTCTGTTTTGCAATGTCCACTTGGTCAATTCTTCTTCGCTGAGAATCGTTCAATTAGGCTTTAATACACTCACGGGCATTCCCGAGCCGCCAAATGCAAGATTTGTCAATGTTTTGGAGATTTTAGAGCTTGAAGAGAATCATATTCGCACTGCATTTCCCTCCTGGTTGACAAATGCGACGTCGTTAACAACTGTTGATATTTCCGGAAACTACTTTTCTGGTATTTTGCCGGTGGATATTGGGAATTTATTGAGGCTAGAGGAGCTGAGGGTGGCAAACAATTCATTATCTGGTGACATCCCTCGTGAAATTGTGAAATGTGCTTCGTTACAGGTTCTTGATCTTCAAGGAAACCGATTCTCCGGCCCCATTCCTTCATTTCTTGGCCAACTGAGGAACCTCAAAATGTTATCTCTGGGCGATAACCTGTTTACTGGTTCTATACCCACGAGTTTGGGAACACTTTCTGAACTCGAGTTGTTGAATTTGAGCGATAATGAACTAAATGGGGTTATACCCCAAGAATTAATGCGATTGGGTAACATGAGTGCTTTGAATCTCAGTAATAATAAATTTTATGGCCAACTTTCGTCTGCCATCGGGGACTTGACAGCTTTGCAGGTTATGAATTTGAGTCATTGTGGGCTTTCAGGACGGATTCCTGCTAGTGTCGGAGGCTTAATGAAACTAACAGTGCTTGATTTAAGTAGGCAAAATCTTTCAGGTGATTTGCCAATCGAGCTTTTCGGATTACCAAGCCTTCAGGTTGTTGCTCTTCAGGAGAACCACTTATCTGGAGGTGTTCCAGAGGGTTTCAGCAGTTTAGTTTCTCTACAACATCTCAATATCAGCTCCAATGTCTTTGCTGGTGAAATTCCAGCTACTTATGGATTTCTTCGGTCGTTACGTGTTTTCTCTGCGTCTCAAAATCATATTTCTGGTAAACTACCATCAGAGATTGGTAACTGTTCTCAGCTTGAAGTGCTCGAGCTTCGCTCAAATCGTTTACATGGTTACATTCCTGGTGATATCTACCGTCTAAATAGCTTAAGGTTCCTTGATTTGGGAGACAACAAGTTAACAGGAGATATTCCGGCAGAATTATCCGAATGTTCTGCTTTGACTTCTCTCCTCTTGGATGCCAATCAACTAACGGGTCAAATACCAGAATCCTTGTCAAGTTTATCAAACCTGACTGCGTTGAATCTCTCCTCAAATCAACTGAGCGGAGAGATTCATGGAAGCCTGTCACTCATACCTGGTCTGAAGTATTTAAATCTCTCTAGAAATAATCTCGAAGGCGAGATTCCAGAAATGCTGGGCTCCCGATTCAAAGATCCTTCTATATTTGCAATGAACGGCAGGTTATGCGGAAAGCCGCTGCATAGAGAATGTGCGAATGTAAGAAGGCGAAAGAGGAAGAGGCTAATAATATTTATAGGTGTGGCTCTGTGTGGAGTATGCCTTCTGGGATTATGCTGCTGCGGCTATATTTATAGCCTCTTAAGGTGGCGCAAGAAGCTGAGAGAAGGGGTAACAGGAGAGAAGAAGAAGAAGAGCCCTGCTCGTTCGAGTTCAGGAGCAGACAGACGTCGAGGGAGTGGTGAAAATGGAGGGCCAAAACTAGTAATGTTCAATAACAAGATCACTTATGGCGAGACACTAGAAGCCACTAGACAATTTGATGAGGAGAATGTGTTGAGCAGAGGAAGATATGGCCTTGTGTTCAAGGCCTCGTACCCAGACGGAATGGTGCTCTCGATCCGTCGTCTCCCGGATGGGTCCATCGAGGAGGGAACATTCCGTAAAGAAGCAGAATCATTAGGAAAGGTGAAGCATCGGAATTTAACAGTATTGCGTGGCTATTATGCAGGACCACCAGACGTGAGGCTGCTTGTTTATGACTACATGCCCAATGGAAACCTCGGGACGCTTCTTCAAGAAGCATCTCAGCAAGATGGCCATGTACTGAATTGGCCGATGCGTCATCTCATCGCACTAGGCATTGCTCGAGGGCTAGCCTTCCTGCATTCAGTCTCAATAGTTCATGGCGATGTGAAGCCTCAAAATGTTCTGTTTGATGCAGATTTTGAAGCTCATTTATCAGAATTCGGGCTAGACAGAATATCAATTGCAACCCCAGCAGAAGCGTCGTCATCGTCCACTCCCATCGGATCGTTGGGGTATGTATCACCGGAAGCAGCATTAACAGGGCAAGCGACGAAGGAGGCCGACGTGTACAGCTTTGGGATAGTACTGTTGGAGATACTGACGGGGAGGAAGCCGGTGATGTTCACGCAAGACGAAGACATTGTGAAATGGGTGAAAAGGCAATTGCAAAAAGGACAGATATCGGAATTGCTGGAGCCTGGGTTGCTAGAGCTAGACCCGGAGTCCTCGGAATGGGAAGAGTTCTTGTTGGGGATCAAAGTGGCTCTTCTATGCACAGCACCAGATCCTCTTGATCGGCCGTCCATGACTGACATTGTTTTCATGCTCGAAGGTTGCCGGGTCGGACAGGAGATCCCATCGTCAGCCGATCCGACCGCGCTACCTTCCCCTAATTGA 3396 0.4703 MATTTASFLCFLLALASFLCRVESLSEIGALTAFKLSLHDPLGSLDGWDPSTPSAPCDWRGVSCSNNRVRELRLPRLQLAGPLSDSLSNLPQLRKLSLHSNNFNGSIPPSLSQCLLLRSVYLHNNSLSGKLPPALLNLTNLQILDVAHNSLSGRILGDFSNSLLFLDLSSNAFSGDIPANVSSKSQLRLINLSYNRFSGRIPGTVGVLGLLEYLWLDSNQLYGTLPSALVNCSSLVHLSAENNALSGLIPSTIGTMPRLQVLSLSSNQLSGSVPTSLFCNVHLVNSSSLRIVQLGFNTLTGIPEPPNARFVNVLEILELEENHIRTAFPSWLTNATSLTTVDISGNYFSGILPVDIGNLLRLEELRVANNSLSGDIPREIVKCASLQVLDLQGNRFSGPIPSFLGQLRNLKMLSLGDNLFTGSIPTSLGTLSELELLNLSDNELNGVIPQELMRLGNMSALNLSNNKFYGQLSSAIGDLTALQVMNLSHCGLSGRIPASVGGLMKLTVLDLSRQNLSGDLPIELFGLPSLQVVALQENHLSGGVPEGFSSLVSLQHLNISSNVFAGEIPATYGFLRSLRVFSASQNHISGKLPSEIGNCSQLEVLELRSNRLHGYIPGDIYRLNSLRFLDLGDNKLTGDIPAELSECSALTSLLLDANQLTGQIPESLSSLSNLTALNLSSNQLSGEIHGSLSLIPGLKYLNLSRNNLEGEIPEMLGSRFKDPSIFAMNGRLCGKPLHRECANVRRRKRKRLIIFIGVALCGVCLLGLCCCGYIYSLLRWRKKLREGVTGEKKKKSPARSSSGADRRRGSGENGGPKLVMFNNKITYGETLEATRQFDEENVLSRGRYGLVFKASYPDGMVLSIRRLPDGSIEEGTFRKEAESLGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLGTLLQEASQQDGHVLNWPMRHLIALGIARGLAFLHSVSIVHGDVKPQNVLFDADFEAHLSEFGLDRISIATPAEASSSSTPIGSLGYVSPEAALTGQATKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKRQLQKGQISELLEPGLLELDPESSEWEEFLLGIKVALLCTAPDPLDRPSMTDIVFMLEGCRVGQEIPSSADPTALPSPN 1131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0415 1131 Pfam Protein kinase domain 839 1106 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g0415 1131 ProSitePatterns Serine/Threonine protein kinases active-site signature. 957 969 IPR008271 GO:0004672|GO:0006468
Prci8g0415 1131 ProSiteProfiles Leucine-rich repeat profile. 673 695 IPR001611 GO:0005515
Prci8g0415 1131 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 453 745 - -
Prci8g0415 1131 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 385 1111 - -
Prci8g0415 1131 SMART serkin_6 837 1108 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g0415 1131 SMART LRR_typ_2 431 455 IPR003591 -
Prci8g0415 1131 SMART LRR_typ_2 527 550 IPR003591 -
Prci8g0415 1131 SMART LRR_typ_2 671 694 IPR003591 -
Prci8g0415 1131 SMART LRR_typ_2 575 599 IPR003591 -
Prci8g0415 1131 SMART LRR_typ_2 623 647 IPR003591 -
Prci8g0415 1131 SMART LRR_typ_2 208 232 IPR003591 -
Prci8g0415 1131 SMART LRR_typ_2 90 114 IPR003591 -
Prci8g0415 1131 SMART LRR_typ_2 407 430 IPR003591 -
Prci8g0415 1131 SMART LRR_typ_2 359 383 IPR003591 -
Prci8g0415 1131 SMART LRR_typ_2 256 280 IPR003591 -
Prci8g0415 1131 SMART LRR_typ_2 695 719 IPR003591 -
Prci8g0415 1131 SMART LRR_typ_2 479 503 IPR003591 -
Prci8g0415 1131 SMART LRR_typ_2 138 163 IPR003591 -
Prci8g0415 1131 SUPERFAMILY Protein kinase-like (PK-like) 816 1118 IPR011009 -
Prci8g0415 1131 Gene3D Ribonuclease Inhibitor 281 382 IPR032675 -
Prci8g0415 1131 ProSiteProfiles Protein kinase domain profile. 837 1109 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g0415 1131 SUPERFAMILY RNI-like 461 719 - -
Prci8g0415 1131 Gene3D Phosphorylase Kinase; domain 1 809 912 - -
Prci8g0415 1131 Gene3D Ribonuclease Inhibitor 455 744 IPR032675 -
Prci8g0415 1131 FunFam Putative LRR receptor-like serine/threonine-protein kinase 800 912 - -
Prci8g0415 1131 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Prci8g0415 1131 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 24 183 - -
Prci8g0415 1131 SUPERFAMILY L domain-like 27 304 - -
Prci8g0415 1131 MobiDBLite consensus disorder prediction 789 812 - -
Prci8g0415 1131 MobiDBLite consensus disorder prediction 789 817 - -
Prci8g0415 1131 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 238 452 - -
Prci8g0415 1131 Pfam Leucine rich repeat 337 396 IPR001611 GO:0005515
Prci8g0415 1131 Pfam Leucine rich repeat 408 468 IPR001611 GO:0005515
Prci8g0415 1131 Pfam Leucine rich repeat 505 562 IPR001611 GO:0005515
Prci8g0415 1131 Pfam Leucine rich repeat 649 708 IPR001611 GO:0005515
Prci8g0415 1131 Pfam Leucine rich repeat 584 636 IPR001611 GO:0005515
Prci8g0415 1131 Gene3D Ribonuclease Inhibitor 24 209 IPR032675 -
Prci8g0415 1131 Gene3D Transferase(Phosphotransferase) domain 1 913 1122 - -
Prci8g0415 1131 Gene3D Ribonuclease Inhibitor 210 280 IPR032675 -
Prci8g0415 1131 Gene3D Ribonuclease Inhibitor 383 454 IPR032675 -
Prci8g0415 1131 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 913 1117 - -
Prci8g0415 1131 SUPERFAMILY L domain-like 285 542 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0415 Prci-Chr8 2623762 2628006 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0415 1 1130 Receptor kinase-like Gene Family AT4G36180 62.927 0.0 1360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-3 Prci8g0415 Pkinase 1.1e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0415 - - jre:108991311 1630.15