Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0412 ATGCAAAAAATGGCTGACTGGTTCTCTCTAGGTGGAAAACAAGGTCCACAAGCGAAGGTAGAAAAAGGAAAAGAAGATAACAGCAACAGCAATTGCCTATTCTTGTTGAGGGACGAGGAGATCTACAACAACAAGGGATTCGAGATATGGACGCAGTCTTATCACCATCACCCAAATCAATCCTTGAACAACTGCTTCTCTCTTGGGGTGGGTCCTAGTTGCGCGAACTTGTTTGATGAGTCAAGGAGGTTTGGATTGACGGTGATGAGGTCTGGGACTCTAGGAGGCGGCATGAATTGTCAGGACTGTGGGAACCAAGCGAAGAAAGACTGTACACATCTTAGATGCAGGACTTGTTGTAGGAGTCGAGGGTTTCAGTGCCAAACCCACGTCAAGAGCACTTGGGTTCCTGCTGCCAGACGTCGCGAGCGACAGCAACAGCACCTACAGCACCAGCAGCTTCACGGAGATACCTCCAAACGCCACAGAGAAACTCAGGGTGCAGCAGCTCTTGCTTGCATTCCTTCACCAATCACCACTACAGGGTTGGAACTGGGACAATTCCCTCATGAACTGAACTCACCAGCAGTATTTCAGTGTGTGAGAGTTAACTCAATGGACACACCAGAAGAACAGTACGCCTATCAAACCGCTGTGAACATCGGAGGGCATGTTTTCAAGGGAATCCTATACGATCAAGGTCCTGATGCTCCTTATAACGCAGGTGGTGATCTTAGCTCCTCCACCGCAGCTGATGCTGATCAGAACCTGAGTCTCATAACGGCCTCAACCACAGCAGCCCCGGCCAGCGTCAACCCGTTTGATCCTTCACTCTACCCTAATATCCCACTTAATACTTTCATGGCTGGTACGCAGTTCTTTCCACCACCAAGATCCTAA 900 0.4933 MQKMADWFSLGGKQGPQAKVEKGKEDNSNSNCLFLLRDEEIYNNKGFEIWTQSYHHHPNQSLNNCFSLGVGPSCANLFDESRRFGLTVMRSGTLGGGMNCQDCGNQAKKDCTHLRCRTCCRSRGFQCQTHVKSTWVPAARRRERQQQHLQHQQLHGDTSKRHRETQGAAALACIPSPITTTGLELGQFPHELNSPAVFQCVRVNSMDTPEEQYAYQTAVNIGGHVFKGILYDQGPDAPYNAGGDLSSSTAADADQNLSLITASTTAAPASVNPFDPSLYPNIPLNTFMAGTQFFPPPRS 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0412 299 MobiDBLite consensus disorder prediction 143 162 - -
Prci8g0412 299 Pfam Domain of unknown function (DUF702) 97 236 - -
Prci8g0412 299 NCBIfam LRP1 C-terminal domain 187 235 IPR006511 -
Prci8g0412 299 NCBIfam putative zinc finger domain, LRP1 type 99 141 IPR006510 -
Prci8g0412 299 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 17 285 IPR007818 GO:0003700|GO:0006355
Prci8g0412 299 MobiDBLite consensus disorder prediction 1 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0412 Prci-Chr8 2595868 2598222 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0412 4 299 C2H2 Transcription Factor Family AT1G75520 43.466 5.38e-75 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Prci8g0412 DUF702 5.9e-61 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0412 - - pcin:129317944 592.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g0152 2 1234690 1237556 Prci8g0412 8 2595868 2598222 CCT
Prci8g0412 8 2595868 2598222 Prci8g0412 8 2595868 2598222 ECH