Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0411 ATGCAAAAAATGGCTGACTGGTTCTCTCTAGGTGGAAAACAAGGTCCACAAGCGAAGGTAGAAAAAGGAAAAGAAGATAACAGCAACAGCAATTGCCTATTCTTGTTGAGGGACGAGGAGATCTACAACAACAAGGGATTCGAGATATGGACGCAGTCTTATCACCATCACCCAAATCAATCCTTGAACAACTGCTTCTCTCTTGGGGTGGGTCCTAGTTGCGCGAACTTGTTTGATGAGTCAAGGAGGTTTGGATTGACGGTGATGAGGTCTGGGACTCTAGGAGGCGGCATGAATTGTCAGGACTGTGGGAACCAAGCGAAGAAAGACTGTACACATCTTAGATGCAGGACTTGTTGTAGGAGTCGAGGGTTTCAGTGCCAAACCCACGTCAAGAGCACTTGGGTTCCTGCTGCCAGACGTCGCGAGCGACAGCAACAGCACCTACAGCACCAGCAGCTTCACGGAGATACCTCCAAACGCCACAGAGAAACTCAGGGTGCAGCAGCTCTTGCTTGCATTCCTTCACCAATCACCACTACAGGGTTGGAACTGGGACAATTCCCTCATGAACTGAACTCACCAGCAGTATTTCAGTGTGTGAGAGTTAACTCAATGGACACACCAGAAGAACAGTACGCCTATCAAACCGCTGTGAACATCGGAGGGCATGTTTTCAAGGGAATCCTATACGATCAAGGTCCTGATGCTCCTTATAACGCAGGTGGTGATCTTAGCTCCTCCACCGCAGCTGATGCTGATCAGAACCTGAGTCTCATAACGGCCTCAACCACAGCAGCCCCGGCCAGCGTCAACCCGTTTGATCCTTCACTCTACCCTAATATCCCACTTAATACTTTCATGGCTGCTGAGAAGAGTCTTCTCTTGTCAATGACTCTGGAATATTGA 909 0.4895 MQKMADWFSLGGKQGPQAKVEKGKEDNSNSNCLFLLRDEEIYNNKGFEIWTQSYHHHPNQSLNNCFSLGVGPSCANLFDESRRFGLTVMRSGTLGGGMNCQDCGNQAKKDCTHLRCRTCCRSRGFQCQTHVKSTWVPAARRRERQQQHLQHQQLHGDTSKRHRETQGAAALACIPSPITTTGLELGQFPHELNSPAVFQCVRVNSMDTPEEQYAYQTAVNIGGHVFKGILYDQGPDAPYNAGGDLSSSTAADADQNLSLITASTTAAPASVNPFDPSLYPNIPLNTFMAAEKSLLLSMTLEY 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0411 302 Pfam Domain of unknown function (DUF702) 97 236 - -
Prci8g0411 302 NCBIfam putative zinc finger domain, LRP1 type 99 141 IPR006510 -
Prci8g0411 302 MobiDBLite consensus disorder prediction 143 162 - -
Prci8g0411 302 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 17 285 IPR007818 GO:0003700|GO:0006355
Prci8g0411 302 NCBIfam LRP1 C-terminal domain 187 235 IPR006511 -
Prci8g0411 302 MobiDBLite consensus disorder prediction 1 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0411 Prci-Chr8 2595868 2598222 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0411 4 297 C2H2 Transcription Factor Family AT1G19790 42.105 1.04e-68 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Prci8g0411 DUF702 6e-61 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0411 - - pcin:129317944 615.15