Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0409 ATGACTGATGGAGGATGCAGTCCGACGATGGATCTGTTGCGGTCGGAGCCAATGCAACTAGTCCAGCTCATCATTCCGACCGAATCGGCTTACCGAGCCATCTCTTACCTAGGCGATCTCGGCCTCTTTCAATTCAAAGATCTTAATGCAGAAAAAAGCCCATTCCGACGGACATATGCTGCTCAGATTAAAAGATGTGGGGAAATGACATGCAAGCTACGGTTCTTTAAGGAACAAATGGCAAAGGCTGGCGTATCACCCTCGACAAGGTCAATGAGAGACGGAGAAGTAGATCTGGACTATCTAGAGGTTAAACTTGCAGAGCTTGAAGCTGAGTTAATTGAGAATAATGCGAATAATGATAAGTTGCAACATAGTTACAGTGAGCTGTTAGAGTATAAACTCGTTATGCAGAAGGTTGGTGAGTTTTTCTCTCCGGCACAAAAAAGCGCAGCATCTCAACAGAGAGAGCTTGGAGTTCAGAGCAATTCCGAAGGGTCAATTGACAGCCCATTATTACAGGAACAAGAGATGACAACGGAAACATCAAAGCCAATCAAACTGGGCTTTATCGCTGGCCTTGTTCCAAGAGAAAAATCAACGTCTTTTGAAAGAATTTTATTTCGTGCTACTAGGGGTAACTTGTTTCTGAAGCAAGCCATGATTGAACATCCTGTACTTGATCCTTTGTCAGGAGAGAAGGTTGATAAAAATGTGTTTCTTATCTTCTATTCTGGAGAAAGAGCTAATAGTAAAATTCAAAAAATATGCGATGCCTTTGGAGCAAATCGTTATCCTTTCACAGACGACTTGAGTAAACAATTTCAAATGATTACAGAGGTGTCCGGAAGACTTTCCGAATTGAAGACTACCATTGATGCTGGATTGCTACACAGGAGCACTATATTGCAGACAATTGGATATCACTGCGAGCTGTGGAGCCTTCTGGTGAAGAAGGTAAAATCCATTTATCACACTTTGAATATGTTTAGCATCGATGTGACAAGGAAATGTTTGTTCGCAGAAGGTTGGTGCCCTGTTTTTGCAACAAATCAGATTCAAAGTGCATTGCAGCGAGCAAGCATGGACAGTAACTCACAAGTTGGCGCCATATTCCAGGTTTTACAAGCAAAGGAATCACCACCTACCTACTTCCGGACAAACAAATTCACTTCTGCTTTTCAAGAAATTGTAGATGCTTATGGAATTGCCAAATACCGTGAGGCAAATCCTGGTGTATTCACAATCATCACATTTCCATTCCTTTTCGCTGTTATGTTTGGTGATTGGGGACATGGTACATGCTTATTGCTGGCTACTTTATATTTCATTACCAGAGGGAACAAATTTTCTAGTCAGAAACTTGGGGATATCGTAGAAATGATTTTTGGTGGCCGCTACGTTATAATGATGATGGCACTGTTCTCAATCTACACAGGATTGATATACAATGAATTCTTCTCTGTTCCATTTGAACTATTTGGGCCATCTGCCTATGGATGCCGTGATCCTTCATGCAGGGATGCTGGCACAACTGGTCTGGTTAGAGTCCGAAGAATTTATCCATTTGGTTTGGATCCTAAATGGCGCGGTACAAGGAGTGAATTGCCATTTCTTAACTCCCTAAAGATGAAGATGTCAATCCTACTGGGTGTAGCCCAGATGAATGTTGGAATTATATTGAGTTACCGTAATGCAAAATACTTTGGAAATGACATAAATATCTGGCACCAGTTTATTCCCCAGATGATATTTTTGAATAGTTTGTTCGGCTACCTTTCACTCCTCATAATCGTTAAATGGTGTACTGGATCTCAAGCGGACCTGTATCATGTGATGATATACATGTTCTTAAGTCCAACTGATGATTTGGGTGAAAACCGGCTCTTTGTAGGCCAGAAGCTCCTTCAAAAGCAACATCGAGAAAGACATCAAGGTCAATCCTACTCTCTGCTTCATGCCATCGACGATCCTCTTGAAGCAGAACCACATAGTGACACCGAACATCATGAGGATTTTGATTTCAGCGAGGTGTTTGTGCACCAACTTATACACACAATAGAATTTGTTCTTGGCGCAGTATCCAACACAGCATCATATTTACGTTTATGGGCTCTCAGGTATGTAGTTAAAACTATGTTGTTTGTATATGTATACTTCAACGGATGCATAGTGACTACATTCAACAATGCACATTAG 2199 0.4129 MTDGGCSPTMDLLRSEPMQLVQLIIPTESAYRAISYLGDLGLFQFKDLNAEKSPFRRTYAAQIKRCGEMTCKLRFFKEQMAKAGVSPSTRSMRDGEVDLDYLEVKLAELEAELIENNANNDKLQHSYSELLEYKLVMQKVGEFFSPAQKSAASQQRELGVQSNSEGSIDSPLLQEQEMTTETSKPIKLGFIAGLVPREKSTSFERILFRATRGNLFLKQAMIEHPVLDPLSGEKVDKNVFLIFYSGERANSKIQKICDAFGANRYPFTDDLSKQFQMITEVSGRLSELKTTIDAGLLHRSTILQTIGYHCELWSLLVKKVKSIYHTLNMFSIDVTRKCLFAEGWCPVFATNQIQSALQRASMDSNSQVGAIFQVLQAKESPPTYFRTNKFTSAFQEIVDAYGIAKYREANPGVFTIITFPFLFAVMFGDWGHGTCLLLATLYFITRGNKFSSQKLGDIVEMIFGGRYVIMMMALFSIYTGLIYNEFFSVPFELFGPSAYGCRDPSCRDAGTTGLVRVRRIYPFGLDPKWRGTRSELPFLNSLKMKMSILLGVAQMNVGIILSYRNAKYFGNDINIWHQFIPQMIFLNSLFGYLSLLIIVKWCTGSQADLYHVMIYMFLSPTDDLGENRLFVGQKLLQKQHRERHQGQSYSLLHAIDDPLEAEPHSDTEHHEDFDFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALRYVVKTMLFVYVYFNGCIVTTFNNAH 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0409 732 Pfam V-type ATPase 116kDa subunit family 36 638 IPR002490 GO:0033179|GO:0046961|GO:1902600
Prci8g0409 732 Pfam V-type ATPase 116kDa subunit family 654 706 IPR002490 GO:0033179|GO:0046961|GO:1902600
Prci8g0409 732 Coils Coil 92 126 - -
Prci8g0409 732 PIRSF ATP6V0A1 636 709 IPR026028 GO:0000220|GO:0046961
Prci8g0409 732 PIRSF ATP6V0A1 8 640 IPR026028 GO:0000220|GO:0046961
Prci8g0409 732 PANTHER VACUOLAR PROTON ATPASES 12 707 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0409 Prci-Chr8 2580972 2588372 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0409 10 725 Primary Pumps ATPases(2) AT4G39080 68.625 0.0 1068
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0409 K02154 - jre:109008274 1138.25