Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0384 ATGGAATCTACCAATCTCCATCACCTTCAAGACCAACCTCCCCCTCCCCAGACTTCTTCTCTATGCACCCCTTCTTTCTTTGGCCAACAATCCACGCATTCTTGGACCCCTAATGTCTCCCTGAATGCTTCTAACGTGAACCCGAATTTCCAAGAAGCAAATCCCAGATCAAGAGCTTTCGCGCATAAGAAAGACATTGGAGCCCATCTTCTTAACGCTTCATCAGGATTAGGTTATCAGTGGGCAAGTGCAGAAGAAAGCTGCGTGAGCAGTACTACTCAGTCAGATCACGACTTAGACCTCCAGTATTCAAATATAAAGGAAGAGATCCTAGACGCTTTCCCCTGTAAATTCACTGAAATGCTAAACAGCACTGGTGGTTCCGGTATGGAGCACAAAGATTTCAATGCTCTAAGTGAGAAGCTCTTGCTCAAGACCCTCTCCTCCGGAGATTTTTACTCCACTTCTTCTCAAAATTTTGCTAATAATTTTGGTGGTATGGGTGTGGGAGTGCCACCTAGTGGAAGGAGCTTTAGCCAGATTTACCCCAGTATTAATATTTCAAACTTAAACCATTCTTCCCCGGCTATGTCGAGTTCTTTGGATATGAACCTGCAGAGCTCAGATCTATTAAACTCTGCAAGATTTAATGGCGGTTTGAGCCAACCCACCCAGGACGGTTTAGCCAGATTTGACAGCGTTTCTTTTCGTCTTGATCATACGCAGCACCAAATCGACAGGTCTTCATGCAACTCTAGTAATCCATCACACTTCACTAATGGGATGGCAGAAACGAAGAGGCCCAACACAACTTTGGTGGAGTCAAAGGCTTCTCAATCTCAAAATGTGCCAAAAAAATCACGATTGGAATCGCGCTCATCATGCCCACCCTTTAAGGTTAGGAAAGAGAAACTAGGAGATAGGGTTGCGGCTCTTCAACAGTTGGTGGCTCCTTTTGGGAAGACAGACACAGCATCTGTACTCATGGAGGCCATTGGATACATCAAATTCCTTCAAAGCCAAGTCGAGACGCTAAGCGTTCCATACATGAAGTCATCACGGAACCACAGCAACAGAGCGATGCAAGGGGTTTCAGGATTAGGTGAGGCGATGATAGAAGAACCGAAGTTAGATCTAAGGAGCCGAGGCCTTTGTCTCGTGCCACTGTCATGTATGTCTTACTTGGCAGCTGAGGGTGCTGGTGGAGTGTGGCAACAGTCTGATTTTGGCGGCGCAACACTGTGA 1245 0.4627 MESTNLHHLQDQPPPPQTSSLCTPSFFGQQSTHSWTPNVSLNASNVNPNFQEANPRSRAFAHKKDIGAHLLNASSGLGYQWASAEESCVSSTTQSDHDLDLQYSNIKEEILDAFPCKFTEMLNSTGGSGMEHKDFNALSEKLLLKTLSSGDFYSTSSQNFANNFGGMGVGVPPSGRSFSQIYPSINISNLNHSSPAMSSSLDMNLQSSDLLNSARFNGGLSQPTQDGLARFDSVSFRLDHTQHQIDRSSCNSSNPSHFTNGMAETKRPNTTLVESKASQSQNVPKKSRLESRSSCPPFKVRKEKLGDRVAALQQLVAPFGKTDTASVLMEAIGYIKFLQSQVETLSVPYMKSSRNHSNRAMQGVSGLGEAMIEEPKLDLRSRGLCLVPLSCMSYLAAEGAGGVWQQSDFGGATL 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0384 414 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 299 351 IPR036638 GO:0046983
Prci8g0384 414 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 127 393 - -
Prci8g0384 414 CDD bHLH_AtbHLH_like 296 346 IPR045239 -
Prci8g0384 414 MobiDBLite consensus disorder prediction 245 289 - -
Prci8g0384 414 MobiDBLite consensus disorder prediction 245 294 - -
Prci8g0384 414 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 289 338 IPR011598 GO:0046983
Prci8g0384 414 FunFam Transcription factor bHLH123 family 299 361 - -
Prci8g0384 414 Gene3D - 299 361 IPR036638 GO:0046983
Prci8g0384 414 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0384 Prci-Chr8 2394340 2398385 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0384 24 394 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27660 41.667 7.35e-69 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0384 - - pcin:129318806 815.839