Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0363 ATGGCCTCGAGCTCGACTTGGACGGCGAAGCAGAACAAGAGATTTGAGAATGCTCTGGCCTTGTACGACGAGGAGACGCCGGACCGGTGGCAGAAGATGGCGAGAGCTGTGGGAGGGAAGACGGTGGAGGAGGTGAAGAGGCATTATGAGAAGCTTGTTGACGATGTGAAGCTGATCGAGGAAGGCCATGTCCCTTTGCCTAACTACACTACAAGCGCTCAGCCACTACGAGGAGGACCCGCTTCCACCATCAGAACTTACAGTACTTACTTGAATGAACAAGAGCGAAGGATGAAGAGCCTGAGCCTCCAGTAA 315 0.5365 MASSSTWTAKQNKRFENALALYDEETPDRWQKMARAVGGKTVEEVKRHYEKLVDDVKLIEEGHVPLPNYTTSAQPLRGGPASTIRTYSTYLNEQERRMKSLSLQ 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0363 104 SMART sant 3 55 IPR001005 -
Prci8g0363 104 Gene3D - 1 66 - -
Prci8g0363 104 Pfam Myb-like DNA-binding domain 5 52 IPR001005 -
Prci8g0363 104 ProSiteProfiles Myb-like domain profile. 1 53 IPR001005 -
Prci8g0363 104 FunFam Transcription factor SRM1 1 66 - -
Prci8g0363 104 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 3 73 IPR044636 GO:0003700
Prci8g0363 104 CDD SANT 6 53 IPR001005 -
Prci8g0363 104 SUPERFAMILY Homeodomain-like 5 61 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0363 Prci-Chr8 2302993 2303854 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Prci8g0363 Myb_DNA-binding 7.5e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0363 - - vra:106761704 139.813