Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0318 ATGGAGGAGAAGAAAGAGGAGAACCCGACGGTAGAAGTGCGGTACCGCGGAGTTCGGCGGCGGCCGTGGGGGAAGTTTGCAGCGGAGATAAGAGACCCGACGAAGCAAGGGGCAAGGCTGTGGCTGGGGACATTTGAAACAGCTGAAGAGGCGGCAAGAGCTTATGACAGAGCTGCTTACAACTTCAGGGGTCATCTTGCAGTTCTTAATTTTCCCCGAGAATACAATCTTCCTTCTCCTCCGCCCTATCAGCCATTTTCTTCATATCCTGCTCGCGGAGGTGATCACACTGCCACTTCCTCAACTGCTGGGCAGCGCGTCCAGGAGGAAGTTGTTGAGTTTGAGTGCTTGGACGATAAGATACTGGAAGAGCTTCTTGAATCTCATGAGAAGAACAAAGGAAACTGA 408 0.5221 MEEKKEENPTVEVRYRGVRRRPWGKFAAEIRDPTKQGARLWLGTFETAEEAARAYDRAAYNFRGHLAVLNFPREYNLPSPPPYQPFSSYPARGGDHTATSSTAGQRVQEEVVEFECLDDKILEELLESHEKNKGN 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0318 135 Gene3D AP2/ERF domain 13 73 IPR036955 GO:0003700|GO:0006355
Prci8g0318 135 CDD AP2 14 72 IPR001471 GO:0003700|GO:0006355
Prci8g0318 135 MobiDBLite consensus disorder prediction 81 106 - -
Prci8g0318 135 Pfam AP2 domain 14 65 IPR001471 GO:0003700|GO:0006355
Prci8g0318 135 ProSiteProfiles AP2/ERF domain profile. 14 72 IPR001471 GO:0003700|GO:0006355
Prci8g0318 135 PANTHER DNA-BINDING DOMAIN 5 127 IPR044808 GO:0003700|GO:0009873
Prci8g0318 135 SUPERFAMILY DNA-binding domain 14 73 IPR016177 GO:0003677
Prci8g0318 135 FunFam Ethylene-responsive transcription factor 2 13 74 - -
Prci8g0318 135 SMART rav1_2 14 77 IPR001471 GO:0003700|GO:0006355
Prci8g0318 135 PRINTS Ethylene responsive element binding protein signature 38 54 IPR001471 GO:0003700|GO:0006355
Prci8g0318 135 PRINTS Ethylene responsive element binding protein signature 15 26 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0318 Prci-Chr8 2043158 2043808 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0318 12 133 AP2-EREBP Transcription Factor Family AT3G23230 59.843 5.20e-46 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci8g0318 AP2 2.2e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0318 - - zju:107422875 157.532