Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0296 ATGGAAGCGATCAATAGATGCTCTTCCTCCACTTCTTCCTCTGACTCTTCCACTTCCGGCTCTTCCTTTTCCAGCAACCCCCGGAGGATTCGGGACAACCCCGACAGAATCAAAGGCCCCTGGAGCGCCGAAGAAGACCGGATTCTGACCCGACTCGTTGAACGATACGGGCCCCGAAACTGGTCCCTTATCAGTCGTTACATCAAGGGAAGGTCGGGCAAGTCCTGCCGCCTGAGATGGTGTAACCAGTTGAGCCCCAGCGTGGAGCACCGTCCATTCTCACAGGAAGAGGACGACACCATCATAGCGGCTCATGCCCAGTACGGTAACAGGTGGGCCACCATCGCCCGGCTGCTCCCGGGTCGGACCGACAATGCGGTGAAGAACCACTGGAACTCCACGCTCAAGAGAAGGGTGAGGGAGCAGCGTTCGGCGGAGGGAGGCGATGCCGGTGTTGCCAACGAGAGGGTTCTTAGTTCTCCGGGATCTGTGCAGCCCTGCATGGTATCGGAAATGGAAAATGACCCGTTGACGGCATTGACTCTGGCGCCGCCTGGAGCTAATGGGGAGGTGGCCGAGCGCCGGCCAAGTTCGGAGAATGTGCCGGCGGGTTTCTGGGACGTGATGAGAGATGTGATAGCGAGGGAAGTCAGAGAATATGTTTCTTCCACGTTTTCTGAGAACCCGGGTTTCCATTGA 699 0.578 MEAINRCSSSTSSSDSSTSGSSFSSNPRRIRDNPDRIKGPWSAEEDRILTRLVERYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHRPFSQEEDDTIIAAHAQYGNRWATIARLLPGRTDNAVKNHWNSTLKRRVREQRSAEGGDAGVANERVLSSPGSVQPCMVSEMENDPLTALTLAPPGANGEVAERRPSSENVPAGFWDVMRDVIAREVREYVSSTFSENPGFH 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0296 232 Gene3D - 91 151 - -
Prci8g0296 232 SUPERFAMILY Homeodomain-like 35 131 IPR009057 -
Prci8g0296 232 Pfam Myb-like DNA-binding domain 41 99 - -
Prci8g0296 232 PANTHER MYB PROTEIN-RELATED 38 169 - -
Prci8g0296 232 MobiDBLite consensus disorder prediction 140 168 - -
Prci8g0296 232 FunFam Transcription factor MYB44 92 138 - -
Prci8g0296 232 Gene3D - 37 89 - -
Prci8g0296 232 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 33 88 IPR017930 -
Prci8g0296 232 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 90 139 IPR017930 -
Prci8g0296 232 SMART sant 37 86 IPR001005 -
Prci8g0296 232 SMART sant 89 137 IPR001005 -
Prci8g0296 232 FunFam MYB transcription factor 38 89 - -
Prci8g0296 232 CDD SANT 92 135 IPR001005 -
Prci8g0296 232 ProSiteProfiles Myb-like domain profile. 85 135 IPR001005 -
Prci8g0296 232 MobiDBLite consensus disorder prediction 1 28 - -
Prci8g0296 232 CDD SANT 40 82 IPR001005 -
Prci8g0296 232 ProSiteProfiles Myb-like domain profile. 33 84 IPR001005 -
Prci8g0296 232 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0296 Prci-Chr8 1895459 1896567 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0296 25 151 MYB Transcription Factor Family AT4G37260 71.318 1.57e-60 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci8g0296 Myb_DNA-bind_6 8.9e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0296 - - zju:107420865 313.538