LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci8g0268	ATGGAAGGTTACGACGGGACTGTGAGACTTGGAGCTCTTAACATGAACCACGATCGGAATGAATTTGACTCCGGCCCTGATGTGTCGGTTTCCTCTCCAGTTACCAGACAGAAGGCTGCTGCTGCTAAGCAGTTCATTGAAAATCATTACAAGAATTATCTCCAAGGATTGCAGGATCGAAAAGAGAGACGTATAGCACTTCAAAGGCAAGCACAAGAAGCTCAGGTATCAACTGAAGAACAAGAGCAAATGATGAGGAATTTGGAGCGCCGAGAGACTGAATACATGAGACTGCAGAGGCGTAAAGTTGGAATTGATGACTTTGAGCAGTTAACTGTAATTGGCAAAGGCGCTTTTGGCGAGGTGAGGTTATGTCGTGCTAAAAGTACAGGAGAGATTTATGCCATGAAGAAACTGAAGAAATCAGAAATGCTTAGCCGAGGACAGGTGGAACATGTTCGATCTGAGAGGAATTTACTAGCAGAGGTTGATAGCCGATGCATTGTAAAACTCCATTACTCGTTCCAAGATTCTGATTTCCTGTATCTCATCATGGAGTATTTACCCGGTGGTGACATCATGACATTATTAATGAGAGAAGATATCCTTTCTGAAGATGTTGCTCGCTTCTACATTGCTGAAAGCATCTTAGCTATCCACTCGATACATCAACACAATTACATACACAGGGATATAAAACCAGATAATTTGATACTGGATAAAAATGGCCACCTGAAGCTATCAGATTTTGGCTTATGTAAGCCTCTTGATGATAAGTATTCATCAATTTTGTTGGAAAGTGAAGATTTGACCAGTAATGAATCAACAAGTGAGGCTGAAGGATATTCTGCATCCCCTTGGTTGATGCCAAAGGAGCAATTACAACAGTGGAAACGTAATCGCCGAGCATTGGCATATTCAACTGTTGGAACTCTTGATTACATGGCACCTGAAGTTTTGATAAAAAAGGGCTATGGAATGGAATGTGATTGGTGGTCTCTCGGGGCTATCATGTATGAGATGCTTATCGGATATCCTCCCTTTTGTTCTGATGATCCAAGGATGACATGTCGTAAGATAATTAACTGGAAAACATGCCTTAAATTCCCTGGAGAGCCCAAAATATCAGCTGAGGCTGAGGATCTTATTTGTCACTTATTATGTGATGTGGATACAAGACTTGGAACCAGAGGGGTCGAAGAAATAAAGGCTCATCCATGGTTCAGATCTATTCAGTGGGATACGCTGTATGAAATGGAAGCTGCATATAAACCTACTGTCACTGGAGACTTGGACACACAAAACTTTGAGAAGTTTCCAGATTTAGAAGGACCACCATCCACAACAGCTACCATGGGACCGTGGCGAAAGATGTTAACATCTAAAGACACCAATTTCATAGGATATACTTATAAGAAATCAGACGTCCTTAAATCAATAGGAAGTTCAGATACGGATGTCAGATTGCATGGATCATCACAATCCCCGTCCCTAATTTCCTTGTTAGGTCGTATTGATCTGCAAGACACAGCCATTCCAGAAAGTGAGCAGAAGCCAGATATTTGA	1566	0.4163	MEGYDGTVRLGALNMNHDRNEFDSGPDVSVSSPVTRQKAAAAKQFIENHYKNYLQGLQDRKERRIALQRQAQEAQVSTEEQEQMMRNLERRETEYMRLQRRKVGIDDFEQLTVIGKGAFGEVRLCRAKSTGEIYAMKKLKKSEMLSRGQVEHVRSERNLLAEVDSRCIVKLHYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESILAIHSIHQHNYIHRDIKPDNLILDKNGHLKLSDFGLCKPLDDKYSSILLESEDLTSNESTSEAEGYSASPWLMPKEQLQQWKRNRRALAYSTVGTLDYMAPEVLIKKGYGMECDWWSLGAIMYEMLIGYPPFCSDDPRMTCRKIINWKTCLKFPGEPKISAEAEDLICHLLCDVDTRLGTRGVEEIKAHPWFRSIQWDTLYEMEAAYKPTVTGDLDTQNFEKFPDLEGPPSTTATMGPWRKMLTSKDTNFIGYTYKKSDVLKSIGSSDTDVRLHGSSQSPSLISLLGRIDLQDTAIPESEQKPDI	521

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Prci8g0268	521	CDD	MobB_NDR_LATS-like	42	103	-	-
Prci8g0268	521	Pfam	Protein kinase C terminal domain	427	471	IPR017892	GO:0004674\|GO:0005524\|GO:0006468
Prci8g0268	521	Coils	Coil	71	101	-	-
Prci8g0268	521	Pfam	Protein kinase domain	108	408	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Prci8g0268	521	FunFam	Non-specific serine/threonine protein kinase	307	426	-	-
Prci8g0268	521	SMART	pkinase_C_6	409	473	IPR000961	GO:0004674\|GO:0005524\|GO:0006468
Prci8g0268	521	Gene3D	Transferase(Phosphotransferase) domain 1	194	425	-	-
Prci8g0268	521	Gene3D	Phosphorylase Kinase; domain 1	99	193	-	-
Prci8g0268	521	FunFam	Non-specific serine/threonine protein kinase	192	259	-	-
Prci8g0268	521	ProSiteProfiles	AGC-kinase C-terminal domain profile.	409	481	IPR000961	GO:0004674\|GO:0005524\|GO:0006468

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci8g0268	Prci-Chr8	1730821	1736939	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci8g0268	1	509	AGC Kinase Gene Family	AT5G09890	76.953	0.0	827

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	AGC_NDR	Prci8g0268		Pkinase	5.8e-64	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci8g0268	K08790		-	gmx:100814085	949.888

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