Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0251 ATGCAGTTATCCACCATGGGAAGCATGAAGGTGCATCAGTTGGCACGTGGACTCATTTGGGAGCACGAACCCTCCCTCACGCTCGGCTTCAAACGCTTACGACCTCTTGCTCCTAAGCTCCACAACACTACCCACTCTCACTCTCTTTCCTCTTTCGATCTCAACTCCTTCATCAGACCCGAAAGCGGCCCCAGAAAACTCCCTTCCCCTCACCTTCACGTCAACAAAGATTCTCCACCCCAGGTGGAAACGCACCCAGGAGGAACGAGGTGGAATCCGACGCAGGAACAGATAGGGATATTGGAGATGCTGTACAGGGGTGGAATGCGAACTCCGGATGCTGAGCAGATAGAGCAGATCACTGCTCAGCTAGGCAAGTACGGCAAGATCGAAGGCAAGAATGTTTTCTATTGGTTCCAAAACCACAAAGCCCGTGAACGACAAAAGCAGAAACGCAACCCTAATACCAGTACCACTTCTTCTAGTCCTCCGCCTGCCACTGCCATTCCTTTACTTTGGACACACGGGTATGTTATTCCAGAGATAGAGCAAGATAACCCGTTGAGGAAGAAGTGTAGGAGCTTGGGGTTTGAGTGTTTTCAGTTAGAAGAAAGCAGATTTTTACGTAGAGATGAGGAATATACAACTCTGGAGCTTTTCCCGTTGCACCCGGAAGGCAGATGA 684 0.5 MQLSTMGSMKVHQLARGLIWEHEPSLTLGFKRLRPLAPKLHNTTHSHSLSSFDLNSFIRPESGPRKLPSPHLHVNKDSPPQVETHPGGTRWNPTQEQIGILEMLYRGGMRTPDAEQIEQITAQLGKYGKIEGKNVFYWFQNHKARERQKQKRNPNTSTTSSSPPPATAIPLLWTHGYVIPEIEQDNPLRKKCRSLGFECFQLEESRFLRRDEEYTTLELFPLHPEGR 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0251 227 PANTHER WUSCHEL-RELATED HOMEOBOX 4 9 227 IPR044186 GO:0003700|GO:0010067|GO:0010087|GO:0051301
Prci8g0251 227 CDD homeodomain 89 150 IPR001356 GO:0003677
Prci8g0251 227 Pfam Homeodomain 89 148 IPR001356 GO:0003677
Prci8g0251 227 MobiDBLite consensus disorder prediction 60 93 - -
Prci8g0251 227 SUPERFAMILY Homeodomain-like 83 154 IPR009057 -
Prci8g0251 227 MobiDBLite consensus disorder prediction 153 167 - -
Prci8g0251 227 Gene3D - 88 153 - -
Prci8g0251 227 FunFam WUSCHEL-related homeobox 4 88 155 - -
Prci8g0251 227 MobiDBLite consensus disorder prediction 144 167 - -
Prci8g0251 227 ProSiteProfiles 'Homeobox' domain profile. 84 149 IPR001356 GO:0003677
Prci8g0251 227 SMART HOX_1 86 153 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0251 Prci-Chr8 1577474 1578628 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0251 9 169 Wox Gene Family AT1G46480 58.621 4.56e-60 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Prci8g0251 Homeodomain 3.7e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0251 - - pcin:129317065 353.214