Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0234 ATGTCCGATCAAGAGAATTGCGGGAGGGCCACTCGAGCAGCCAAGAAGAGGGCCGCCGCCGCCATTGCTGAACTGCATGTTACCACCAAGAAGCGCGTGGTGTTGGGAGAGCTCACCAACCTGCCCAATGTTGTCGTGCCGGTGAAGCCATGCCCTCGGCAAGAGATTCAGGGGGAGAAAAGTGGCAGTGTCAAGAGAAAACTCAGAAAAGTGCTGCCCGCAACCACGCCGCCGCCCCCCAACCCCAATGATGCTGATGATCCTCAAATGGTTGGGTCTTATGCTTCAGATATTTACGAGTATCTCCGAACGTTGGAGGTGGATCCCAGAAGAAGACCGTTACCTGATTACATTAAAAAAGTTCAGAGGGATGTTGATCCTAATATGAGAGGCGTTCTGGTAGATTGGTTGGTGGAAGTAGCAGAGGAATACAAGCTTGTTTCAGACACTCTCTATCTTACCGCTGCTTATATCGATAAATATCTATCGTTAAATGCTCTCAGCAGGCAGAAGCTGCAGTTACTGGGTGTTTCTTCGATGCTAATTGCCTCGAAATATGAAGAGATCAAGCCTCCTGAAGTGGAAGAGCTTTGTTACATTACGGACAACACATACACCAAAGAGGAGGTTGTGACCATGGAGGCTGAAATACTCAAGTCATTGAAATTTGAACTGGGATATCCTACAGTAAAGACATTTCTAAGAAGATTCTGTAGAGTTGCTTTGGAGAATTATGAGGCTTCTGAACTCCAGTTTGAATTTCTTACTTGCTACCTTGCGGAGCTCAGTTTGTTAGATTATAGTTGTGTGAAGTTCTTGCCTTCTTTGGTGGCCGCCTCTGTTGTGTTTCTTGCCAGATTTATGTTAAGCCCAAAGACCCATCCTTGGAATTCCACGCTCCGTTTACACTCCAGGTATAAATCATCTGAATTGAAGGACTGTGTGTTGGTCATTCATGACTTGTATCTCAGTAGGAGAGGCGGGTCTTTGCTAGCTGTAAGAGATAAATATAAACAGCATAAGTTCAAATGTGTTGCAACAACGCCTTCTCCTCCAGAGATACCACTTTGTTATTTTGAGGTTACAGAGATGGATCATTAG 1101 0.455 MSDQENCGRATRAAKKRAAAAIAELHVTTKKRVVLGELTNLPNVVVPVKPCPRQEIQGEKSGSVKRKLRKVLPATTPPPPNPNDADDPQMVGSYASDIYEYLRTLEVDPRRRPLPDYIKKVQRDVDPNMRGVLVDWLVEVAEEYKLVSDTLYLTAAYIDKYLSLNALSRQKLQLLGVSSMLIASKYEEIKPPEVEELCYITDNTYTKEEVVTMEAEILKSLKFELGYPTVKTFLRRFCRVALENYEASELQFEFLTCYLAELSLLDYSCVKFLPSLVAASVVFLARFMLSPKTHPWNSTLRLHSRYKSSELKDCVLVIHDLYLSRRGGSLLAVRDKYKQHKFKCVATTPSPPEIPLCYFEVTEMDH 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0234 366 Gene3D - 97 347 - -
Prci8g0234 366 SMART cyclin_7 232 320 IPR013763 -
Prci8g0234 366 SMART cyclin_7 135 219 IPR013763 -
Prci8g0234 366 MobiDBLite consensus disorder prediction 55 90 - -
Prci8g0234 366 CDD CYCLIN_AtCycA-like_rpt2 228 342 - -
Prci8g0234 366 SUPERFAMILY Cyclin-like 86 225 IPR036915 -
Prci8g0234 366 SMART Cyclin_C_2 228 351 IPR004367 -
Prci8g0234 366 FunFam Mitotic cyclin 6 113 213 - -
Prci8g0234 366 Pfam Cyclin, N-terminal domain 97 225 IPR006671 -
Prci8g0234 366 Gene3D - 113 226 - -
Prci8g0234 366 FunFam Cyclin A1 215 347 - -
Prci8g0234 366 PANTHER CYCLINS 78 345 IPR039361 -
Prci8g0234 366 SUPERFAMILY Cyclin-like 227 353 IPR036915 -
Prci8g0234 366 Pfam Cyclin, C-terminal domain 228 350 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0234 Prci-Chr8 1468983 1471777 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0234 1 360 Core Cell Cycle Gene Families AT1G47230 59.836 1.04e-156 443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0234 K06627 - pvy:116125667 483.026