Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0233 ATGTCCGATCAAGAGAATTGCGGGAGGGCCACTCGAGCAGCCAAGAAGAGGGCCGCCGCCGCCATTGCTGAACTGCATGTTACCACCAAGAAGCGCGTGGTGTTGGGAGAGCTCACCAACCTGCCCAATGTTGTCGTGCCGGTGAAGCCATGCCCTCGGCAAGAGATTCAGGGGGAGAAAAGTGGCAGTGTCAAGAGAAAACTCAGAAAAGTGCTGCCCGCAACCACGCCGCCGCCCCCCAACCCCAATGATGCTGATGATCCTCAAATGGTTGGGTCTTATGCTTCAGATATTTACGAGTATCTCCGAACGTTGGAGGTGGATCCCAGAAGAAGACCGTTACCTGATTACATTAAAAAAGTTCAGAGGGATGTTGATCCTAATATGAGAGGCGTTCTGGTAGATTGGTTGGTGGAAGTAGCAGAGGAATACAAGCTTGTTTCAGACACTCTCTATCTTACCGCTGCTTATATCGATAAATATCTATCGTTAAATGCTCTCAGCAGGCAGAAGCTGCAGTTACTGGGTGTTTCTTCGATGCTAATTGCCTCGAAATATGAAGAGATCAAGCCTCCTGAAGTGGAAGAGCTTTGTTACATTACGGACAACACATACACCAAAGAGGAGGTTGTGACCATGGAGGCTGAAATACTCAAGTCATTGAAATTTGAACTGGGATATCCTACAGTAAAGACATTTCTAAGAAGATTCTGTAGAGTTGCTTTGGAGAATTATGAGGCTTCTGAACTCCAGTTTGAATTTCTTACTTGCTACCTTGCGGAGCTCAGTTTGTTAGATTATAGTTGTGTGAAGTTCTTGCCTTCTTTGGTGGCCGCCTCTGTTGTGTTTCTTGCCAGATTTATGTTAAGCCCAAAGACCCATCCTTGGAATTCCACGCTCCGTTTACACTCCAGTTCAAATGTGTTGCAACAACGCCTTCTCCTCCAGAGATACCACTTTGTTATTTTGAGGTTACAGAGATGGATCATTAGGCAATTGTGGGCATGA 1008 0.4633 MSDQENCGRATRAAKKRAAAAIAELHVTTKKRVVLGELTNLPNVVVPVKPCPRQEIQGEKSGSVKRKLRKVLPATTPPPPNPNDADDPQMVGSYASDIYEYLRTLEVDPRRRPLPDYIKKVQRDVDPNMRGVLVDWLVEVAEEYKLVSDTLYLTAAYIDKYLSLNALSRQKLQLLGVSSMLIASKYEEIKPPEVEELCYITDNTYTKEEVVTMEAEILKSLKFELGYPTVKTFLRRFCRVALENYEASELQFEFLTCYLAELSLLDYSCVKFLPSLVAASVVFLARFMLSPKTHPWNSTLRLHSSSNVLQQRLLLQRYHFVILRLQRWIIRQLWA 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0233 335 PANTHER CYCLINS 77 304 IPR039361 -
Prci8g0233 335 Pfam Cyclin, N-terminal domain 97 225 IPR006671 -
Prci8g0233 335 SUPERFAMILY Cyclin-like 227 309 IPR036915 -
Prci8g0233 335 FunFam G2/mitotic-specific cyclin 113 225 - -
Prci8g0233 335 Pfam Cyclin, C-terminal domain 228 304 IPR004367 -
Prci8g0233 335 Gene3D - 97 319 - -
Prci8g0233 335 MobiDBLite consensus disorder prediction 55 90 - -
Prci8g0233 335 SUPERFAMILY Cyclin-like 86 225 IPR036915 -
Prci8g0233 335 SMART cyclin_7 135 219 IPR013763 -
Prci8g0233 335 SMART cyclin_7 232 323 IPR013763 -
Prci8g0233 335 Gene3D - 113 226 - -
Prci8g0233 335 SMART Cyclin_C_2 228 333 IPR004367 -
Prci8g0233 335 FunFam Cyclin superfamily protein, putative 226 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0233 Prci-Chr8 1468971 1471777 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0233 1 300 Core Cell Cycle Gene Families AT1G47230 59.477 8.23e-125 361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0233 K06627 - pvy:116125667 392.119