Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0232 ATGGAGACTCGCGCCGCGAAGAGAAGAGCAGAGGCCGCCAGCTTAGCCCAGAACAGATCACCTAAAAGGAAGCGTGTGGTCTTGGGGGAACTTCCCAATTTATCCAACCTTTTTGATCCCGTCAATTCGAATCCGGGGTTGGAGCCGCAGAAACGGAAATATCGAAGGATTACGAGGGTCAAGAAAGCCGCGACGACCAAGAGCAGCGTCTCTCTGGGGAATCCCAAGTCGGATGACCCGAGGGCGGTCCAGACTCATGCAAAATCAGGCACCGACGCGAATTTGGATGATTTGCAAGATAGCGAGCCTTATGTTTCGGATATTTATCAGTATCTACGCAAAATGGAGAATGAGCCAAAGAGAAGGCCGATGTCTGATTACCTCGAGAAAGTTCAGAAAGATGTTACCGCCAACATGAGGGGGATACTGGTTGATTGGTTAGTTGAAGTTGCAGAGGAGTACAAGCTTCTCTCTGATACTCTTTACCTATCTGTTTCCTACATTGATCGTTTCCTCTCTGCCAACGAAGTTCCTAGGCAGAGGCTTCAGTTGCTGGGCGTTTCATCTATGTTCATTGCATCGAAGTATGAAGAAATTAGCCCTCCGCATGTGGAAGAGTTTTGCTACATCACCGACAATACATACAGGAAGGCAGAGGTTGTAGAAATGGAGGCTGCTATACTCAAATCCCTAAATTTTGAAATGGGAAGTCCCACTGTAAAGACGTTTCTAAGGAGGTTTACTGGCATTACTTCTGAAAATCAGAAAACTCCAAATCTGCTGTTTGAGTTTCTTTGCTGCTATCTTGCCGAGCTAAGTTTGTTGGACTATAATTGTATTAAATTTTTGCCTTCTCTGGTGGCTGCCTCGGTCACATTTCTTGCCAAATTTATTATCCGGCCAAAGGTGCATCCCTGGAATTCAGCCCTGCAAGAATGCTCGGGATATAAATCAGCTGAATTGAAGGATTGTGTGATTATCTTACACGACTTGTACTTGGCAAGAAGGGGAGGATCTTTGCAAGCTATACGGGAGAAATACAAACAGCACAAGTTCAAATACGTGGCAATGCTGCCTTCTTCTCCGGAGATACCGGTTTCTTATTTTGAAGCTTAA 1116 0.4552 METRAAKRRAEAASLAQNRSPKRKRVVLGELPNLSNLFDPVNSNPGLEPQKRKYRRITRVKKAATTKSSVSLGNPKSDDPRAVQTHAKSGTDANLDDLQDSEPYVSDIYQYLRKMENEPKRRPMSDYLEKVQKDVTANMRGILVDWLVEVAEEYKLLSDTLYLSVSYIDRFLSANEVPRQRLQLLGVSSMFIASKYEEISPPHVEEFCYITDNTYRKAEVVEMEAAILKSLNFEMGSPTVKTFLRRFTGITSENQKTPNLLFEFLCCYLAELSLLDYNCIKFLPSLVAASVTFLAKFIIRPKVHPWNSALQECSGYKSAELKDCVIILHDLYLARRGGSLQAIREKYKQHKFKYVAMLPSSPEIPVSYFEA 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0232 371 PANTHER CYCLINS 85 349 IPR039361 -
Prci8g0232 371 ProSitePatterns Cyclins signature. 140 171 IPR006671 -
Prci8g0232 371 Gene3D - 121 236 - -
Prci8g0232 371 Pfam Cyclin, N-terminal domain 107 235 IPR006671 -
Prci8g0232 371 MobiDBLite consensus disorder prediction 60 97 - -
Prci8g0232 371 MobiDBLite consensus disorder prediction 1 26 - -
Prci8g0232 371 FunFam Cyclin A1 225 357 - -
Prci8g0232 371 Pfam Cyclin, C-terminal domain 238 360 IPR004367 -
Prci8g0232 371 PIRSF Cyclin_A_B_D_E 2 368 IPR046965 GO:0016538|GO:0044772
Prci8g0232 371 Gene3D - 107 357 - -
Prci8g0232 371 SUPERFAMILY Cyclin-like 238 361 IPR036915 -
Prci8g0232 371 CDD CYCLIN_AtCycA-like_rpt2 238 352 - -
Prci8g0232 371 SMART Cyclin_C_2 238 361 IPR004367 -
Prci8g0232 371 SUPERFAMILY Cyclin-like 96 235 IPR036915 -
Prci8g0232 371 FunFam Mitotic cyclin 6 123 223 - -
Prci8g0232 371 SMART cyclin_7 145 229 IPR013763 -
Prci8g0232 371 SMART cyclin_7 242 330 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0232 Prci-Chr8 1461543 1464218 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0232 5 370 Core Cell Cycle Gene Families AT1G47210 57.766 1.26e-147 420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0232 K06627 - qsa:O6P43_016015 491.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci8g0232 8 1461543 1464218 Prci8g0232 8 1461543 1464218 ECH