Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0220 ATGAGCTGCAACGGTTGTCGAGTCCTCCGGAAGGGATGCAGCCAAGACTGCGCCCTCAGAGCTTGCCTCCAGTGGATCCATTCCCCTCATTCCCAGGCTCATGCCACTCTCTTCCTCGCCAAATTCTTCGGCCGTAGCGACCTCATGTCCTTCATTTCATCTGTTCCCATCCCTACCAGACCAGTCTTGTTTCGGTCGCTGCTGTACGAAGCGTGCGGGCGAACGGTAAATCCCGTGAACGGCGCCGTCGGTCTCCTGTGGAGTGGTAACTGGCACGTGTGCGAAGCGGCCGTTCAGACGATACTCGCCGGCGGCGTTCTTGGGCCGTTGCCGGAGACTTTTGATGGAGTTCTGCGGCCGATCTTAGGCGAGTCTTCTTCCGACATTGGGAGAACCGTGCGCTTTCAATCCCGGCCATTCATGCAAGACCTCGGAGAAATGGAGCAGAAGTCAGCCTGGGATCTCTCGCTGCTTTCGGAGTCTTACAGCAAGAAAAGACCTGTTACCGGGAGCGTTGCCACGGCGCTGAGGAGGCAGAGCAATCCGACCATGTTGCCAGTTGTTTCTGTTGAATCGGGAATGAGAAGTAGTAGCAGTTGCGGAGACGAGAAGAGTACGAAGCTTTTGGATTTGTTCGTGTAA 642 0.5592 MSCNGCRVLRKGCSQDCALRACLQWIHSPHSQAHATLFLAKFFGRSDLMSFISSVPIPTRPVLFRSLLYEACGRTVNPVNGAVGLLWSGNWHVCEAAVQTILAGGVLGPLPETFDGVLRPILGESSSDIGRTVRFQSRPFMQDLGEMEQKSAWDLSLLSESYSKKRPVTGSVATALRRQSNPTMLPVVSVESGMRSSSSCGDEKSTKLLDLFV 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0220 213 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 160 - -
Prci8g0220 213 Pfam Lateral organ boundaries (LOB) domain 2 100 IPR004883 -
Prci8g0220 213 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0220 Prci-Chr8 1337424 1338475 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0220 1 116 AS2 family AT3G49940 72.414 3.25e-61 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Prci8g0220 LOB 4.7e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0220 - - gmx:100796966 205.297