Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0204 ATGCTCTGGCTGACCGGCGGACCCGGTTGCTCTGGAATTTCGGGTCTCGCTTTTGAAATTGGTCCCGTTGGATTTCGAAACCAGGAATACAATGGGAGCGTGCCTGATCTTGTCTTGAGACCCAGTTCTTGGACAGAGGTGAGCAGCATCATATTCGTAGATTTGCCTGCTGGTACCGGCTTCTCTTACTCCAGAACCATCCAGCAAGGTGACTGGATAACAATTCATCATGCCCATCAATTTCTCAGGAAGTGGCTGATTGATCACCAAGAGTTCCTGACCAATAAAGTATATATCGGCGGCGACTCCTACTCCGGCATTACTCTCCCTGGGATTGTTGAAGAGATATCAAATGGAAATGAAGCTGGTGTCCAGCCCCGGATAAACCTTCAGGGATACCTGCTGGGTAATCCGGTGACATCATTCCAAGCCAATTACGGAGTTCCATTTGCTCATGGAATGGGGTTAATTTCTGATGAGCTTAATGAGTCACTTCAAAATAGTTGCGGGGGAGAGTATACAAGCATAGACCCCAAAAATTTAAACTGTGTCAGAGATATGCAGTCCTTCCAAAAGTGCATTTCAGGAATTAATTTTGCCCATATCTTGGAACCCCTATGCGAATTCGCATTGCAAAAGCCATTTGATGAGATTTCTTGGAGAAAATATTTCACTTACAAGCCCAGGGCAGTTCTCGAATCTCATCTCTCAGTGCCACCCTTAAGCTGCCGGACGTATGCTTATTTCCTATGTGGTTACTGGGCCAACCACCCCGATGTTCGCAAGGCGCTGGGTATCCGAGAGGGAAGTATAGGGAAATGGCAGCGTTGTGAAAATAGAAACTACAAGTTCGAGATCAATGGGTCTTTGGAATATCATATGAATCTTAGCAGAAAAGGCTATCGTTCTTTGATCTACAGTGGCGATCATGACATGATGGTTCCTTTCTTGGACACTCAAGCCTGGATAAGATCTTTGAATTACTCTATCGTGGATGACTGGAGGCCATGGGATACTAATGGCCAGGTTGCAGGATACACGAGGTCTTATTCCAATCAAATGACATTTGCAACCGTGAAGGGTGGAGGACATACAGCTCCAGAATACAAGCGTGAAGAATGTTTTGCCATGTTCAGTCGATGGATATCTAATGGACCTTTGTAG 1164 0.4562 MLWLTGGPGCSGISGLAFEIGPVGFRNQEYNGSVPDLVLRPSSWTEVSSIIFVDLPAGTGFSYSRTIQQGDWITIHHAHQFLRKWLIDHQEFLTNKVYIGGDSYSGITLPGIVEEISNGNEAGVQPRINLQGYLLGNPVTSFQANYGVPFAHGMGLISDELNESLQNSCGGEYTSIDPKNLNCVRDMQSFQKCISGINFAHILEPLCEFALQKPFDEISWRKYFTYKPRAVLESHLSVPPLSCRTYAYFLCGYWANHPDVRKALGIREGSIGKWQRCENRNYKFEINGSLEYHMNLSRKGYRSLIYSGDHDMMVPFLDTQAWIRSLNYSIVDDWRPWDTNGQVAGYTRSYSNQMTFATVKGGGHTAPEYKREECFAMFSRWISNGPL 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0204 387 Pfam Serine carboxypeptidase 1 384 IPR001563 GO:0004185|GO:0006508
Prci8g0204 387 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 1 371 IPR001563 GO:0004185|GO:0006508
Prci8g0204 387 FunFam Carboxypeptidase 289 384 - -
Prci8g0204 387 FunFam Carboxypeptidase 242 386 - -
Prci8g0204 387 Gene3D alpha/beta hydrolase 1 386 IPR029058 -
Prci8g0204 387 SUPERFAMILY alpha/beta-Hydrolases 1 385 IPR029058 -
Prci8g0204 387 PRINTS Carboxypeptidase C serine protease (S10) family signature 40 52 IPR001563 GO:0004185|GO:0006508
Prci8g0204 387 PRINTS Carboxypeptidase C serine protease (S10) family signature 85 110 IPR001563 GO:0004185|GO:0006508
Prci8g0204 387 PRINTS Carboxypeptidase C serine protease (S10) family signature 354 367 IPR001563 GO:0004185|GO:0006508
Prci8g0204 387 PRINTS Carboxypeptidase C serine protease (S10) family signature 53 63 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0204 Prci-Chr8 1254906 1259677 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0204 240 387 Calmodulin-binding Proteins AT2G22960 63.087 5.17e-59 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0204 K16296 - gmx:100792006 539.65