Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0198 ATGGTCGTCCACGAAGAAGAAGCGGTCCAGTTGCCATGTACGGTTCTGGAAACGGGGCTCACACCTGCAGATATACAGGAGCTGTTGTCGCTTATGCAGTCAGGAAATGAAGAAGATGAGACCAGCCCGAGCTCCGGTTCACAAGGCTCGAGCCGGGAGGTTTACTCCAATGACGAGAGAAAGCGCAGGCGGATGCAGTTGAACCGGGAGTCGGCCCGACGGTCTCGCTGGAGAAGGAAGAGACATTTAGAGAACCTGAACACTCAAGCGAACAGCTTCTCAATTGAAAACCAACAGCTCAAAAACCGGCTAGGTCTCGCCATGCATCAACTCCGTCTAGTATGGTTAGAGAATGAACGCCTGAGAACCGAATCCGTGGCCCTCCTGGCCAGACTTTCTGATCTGTACTTGATTCTAGGCTCCATGAATTCGCAAAAAGCGTTGAGCCATATTAATTATTAA 462 0.5087 MVVHEEEAVQLPCTVLETGLTPADIQELLSLMQSGNEEDETSPSSGSQGSSREVYSNDERKRRRMQLNRESARRSRWRRKRHLENLNTQANSFSIENQQLKNRLGLAMHQLRLVWLENERLRTESVALLARLSDLYLILGSMNSQKALSHINY 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0198 153 Coils Coil 83 103 - -
Prci8g0198 153 MobiDBLite consensus disorder prediction 54 72 - -
Prci8g0198 153 Pfam bZIP transcription factor 60 105 IPR004827 GO:0003700|GO:0006355
Prci8g0198 153 Gene3D - 58 112 - -
Prci8g0198 153 PANTHER BZIP TRANSCRIPTION FACTOR 44 39 142 - -
Prci8g0198 153 MobiDBLite consensus disorder prediction 34 81 - -
Prci8g0198 153 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 58 104 IPR004827 GO:0003700|GO:0006355
Prci8g0198 153 SMART brlzneu 56 120 IPR004827 GO:0003700|GO:0006355
Prci8g0198 153 MobiDBLite consensus disorder prediction 34 53 - -
Prci8g0198 153 FunFam BZIP transcription factor 58 110 - -
Prci8g0198 153 SUPERFAMILY Leucine zipper domain 60 110 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0198 Prci-Chr8 1200839 1201648 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0198 16 139 bZIP Transcription Factor Family AT3G49760 35.878 6.84e-18 73.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Prci8g0198 bZIP_1 2.6e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0198 - - qsu:112012154 144.436