Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0182 ATGGGAAGAGCTCCTTGCTGCGACAAAGCCAACGTGAAGAGAGGCCCTTGGTCCCCAGAAGAAGATGCGAAGCTCAAATCCTATATTGAACAGCACGGCACCGGCGGTAACTGGATCGCTTTGCCGCAGAAGATCGGGCTGAAGAGATGTGGGAAAAGTTGCCGTCTAAGGTGGCTGAACTACCTTCGCCCCAATATCAAGCACGGGGGTTTCTCCGAAGAAGAAGACAACATCATCTGCAGCCTCTACGTTAGCATTGGAAGCAGGTGGTCGGTGATTGCTGCTCAATTGCCAGGAAGAACAGATAATGATATAAAGAACTACTGGAACACCAGGTTGAAGAAGAAGCTTCTGGGAAAGCACCGTAAAGAACAAGCACGCTGTCGGGGAAAGAGCAAGCAGGGAATGAATAAGACTATTGTCGGAGATTCATCACTCCTTCCCGAAAACAGTGGTCAAGTTCAGGCTCAACGTCAGTATTGGGCTCACCCACAGATGATGATGATGCCTGTTCTACCAACCTTGCCATGCTCAGACCAAGCCCCGGGTTTCAACGACCAAGATTCCATTAGAAGACTTCTCAAACTCATCAAGCTGGGAGGAGCGTTTTCTGATCAGCCTGATGGGCTCAATTTTCAATTACCAGATGCTACTCCCTCCGAACAGTCGCCAATTTATCAAGTTTCTTCTGTTTCTGCAAGTTCTGTGAACAACAACCAACTACAATTACCTCATTTCCATTACGACTCTGGACTCGATAACTTGATGCAAGGAGGCAGCGCTCTCACCCAAGCACAGGAGGAAATGTCCGTGTCTTATCCACCTGCACTTGATGGGCTGGAATACTTATACATGATCAATCATGATGGTAAGATAGACCCTTCCAGCTCGTGTGACACCAGCACCATAGTTTGTCCTCCTTTACTTGCTTCCGATTATGACCAATGTATGCCGCCACCTCAGGAATTTGCTTTCCAGGAGTTGACTTATCCAGGCGCCCACTAG 1005 0.4836 MGRAPCCDKANVKRGPWSPEEDAKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDNIICSLYVSIGSRWSVIAAQLPGRTDNDIKNYWNTRLKKKLLGKHRKEQARCRGKSKQGMNKTIVGDSSLLPENSGQVQAQRQYWAHPQMMMMPVLPTLPCSDQAPGFNDQDSIRRLLKLIKLGGAFSDQPDGLNFQLPDATPSEQSPIYQVSSVSASSVNNNQLQLPHFHYDSGLDNLMQGGSALTQAQEEMSVSYPPALDGLEYLYMINHDGKIDPSSSCDTSTIVCPPLLASDYDQCMPPPQEFAFQELTYPGAH 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0182 334 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Prci8g0182 334 CDD SANT 71 113 IPR001005 -
Prci8g0182 334 Gene3D - 7 68 - -
Prci8g0182 334 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Prci8g0182 334 Gene3D - 70 140 - -
Prci8g0182 334 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Prci8g0182 334 FunFam Transcription factor RAX3 7 68 - -
Prci8g0182 334 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Prci8g0182 334 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Prci8g0182 334 FunFam Transcription factor MYB36 70 140 - -
Prci8g0182 334 SMART sant 13 64 IPR001005 -
Prci8g0182 334 SMART sant 67 115 IPR001005 -
Prci8g0182 334 CDD SANT 16 62 IPR001005 -
Prci8g0182 334 PANTHER OS09G0431300 PROTEIN 1 217 - -
Prci8g0182 334 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Prci8g0182 334 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0182 Prci-Chr8 1121638 1123275 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0182 1 138 MYB Transcription Factor Family AT5G65790 85.507 2.43e-84 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci8g0182 Myb_DNA-binding 1.7e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0182 K09422 - gmx:778079 341.658