Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0164 ATGTGGATGCAAAAAGGAATGTTGAGTGCTCCTGAGGAGATAGGTGGCCGGGATTCAAGTGTCATAAATGAAACTCCACAAAATGCGACGCCCAACTCACTCATTCAGTGTTATTCATTAAACCTCAATGGCCAAACCCGTATCACAGATGGAATATCAATGCTTTCTGGTTCTGAAGTGCATGGTGCATCTGTAAGTAATGTGAATGCGCACCTGATAAATCCTCAAAGTATTGATTCTGATATACTTGCTTCATCGCAAGGAAAGAACATTTTTGGATATGCATCACATGGAACTTCATGTCCCATGAATAACAGCGAGTTTCAAGAGCAAACAGCTGGAGGAACACCAGTTACCCCTGCTTCACTTGCTGGTATTCTTGCTGCTAGAATTGGTCTTCAAGAAAATTTAGAGAAACCACAAGGTTTGTCTCCTTCATTCAGTTCATTGGACTCATTGGGACCTTTTGTGTTAGACAATTGGTCGTATATTCCAAACCATTTGCATTTAACTTCCCGAGACCATGGCTGCAACAATCATATGCCTGATGGAAACTTGGATTCAAATGGGTGGGCCTCATCAAATGTTACAAACTTGAGCAGCCATGCTTATGTTTCACCTAAGTTTAGTAATGAGCCTGTACTAAGTCTTGCAACATCTCCAGCCACAGGCCAGTTATCAGAGGTGAGTTGTTCTGATGAAGTCACCCGTTGCTTCAATAAAACAAGGTCAGGCTTGGAACATCCCTCTTGCAGCAACAGGGAGCTTGCCATGAGTTTGAACTCAAACAGACACTTTCATTTTTCACAAGCAATGTCGGGATCAAGATATCTTACTGGAGTTCAGGAGATACTCGCTCAACTTGCAAGATTTTCACTCGAGAATCTTGAGCAGGTAAGATATTCAGAAGCAAGTTCTATGTTCAAATTCCACATGGAAGCTCCATTGCAAAGACATGCAGCTGAATCCAAGAAATCCCAGCTGCTGACACTATTAGAACTGGTGGACAACCGATATAATCAATGTTTGGATGAGATTCATACTGTCGTGTCTGCATTCCATGCTGCTACAGAGCTGGACCCACGCGTTCATGCGCATTTTGCTCTTCAAACAATCTCTATCCTATACAAGAACTTGCGAGAGAGGATTAGCAATTGCATTCTTTCCATGGGGCCAGATTTTGACAATTTATGCACAGTGGACAATGAAAGATCTGTTGAAACTTCACTCATCCATAAGCAATTGGCTCTCCAACAGTTGAAACGAAAAGATCATCAATTATGGAGGCCGCAAAGGGGCTTGCCAGAAAACTCTGTCTCAGTCTTACGTGCCTGGATGTTTCAGAACTTTCTCCATCCGTATCCTAAAGATTCAGAGAAGCATTTACTTGCACTAAGAACTGGGTTGACGAGAAGCCAGGTGTCTAACTGGTTCATAAATGCTCGTGTTCGGCTATGGAAACCCATGATTGAGGAAATGTACGCTGAACTGGATCATAAAAGAAAGGCTAGTCGAAATGAAGGAGGAATAGAGAGCAGCCATGGAAGGCTTGAGCGATGA 1560 0.4276 MWMQKGMLSAPEEIGGRDSSVINETPQNATPNSLIQCYSLNLNGQTRITDGISMLSGSEVHGASVSNVNAHLINPQSIDSDILASSQGKNIFGYASHGTSCPMNNSEFQEQTAGGTPVTPASLAGILAARIGLQENLEKPQGLSPSFSSLDSLGPFVLDNWSYIPNHLHLTSRDHGCNNHMPDGNLDSNGWASSNVTNLSSHAYVSPKFSNEPVLSLATSPATGQLSEVSCSDEVTRCFNKTRSGLEHPSCSNRELAMSLNSNRHFHFSQAMSGSRYLTGVQEILAQLARFSLENLEQVRYSEASSMFKFHMEAPLQRHAAESKKSQLLTLLELVDNRYNQCLDEIHTVVSAFHAATELDPRVHAHFALQTISILYKNLRERISNCILSMGPDFDNLCTVDNERSVETSLIHKQLALQQLKRKDHQLWRPQRGLPENSVSVLRAWMFQNFLHPYPKDSEKHLLALRTGLTRSQVSNWFINARVRLWKPMIEEMYAELDHKRKASRNEGGIESSHGRLER 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0164 519 SUPERFAMILY Homeodomain-like 429 497 IPR009057 -
Prci8g0164 519 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 199 502 - -
Prci8g0164 519 Pfam Homeobox KN domain 445 484 IPR008422 GO:0003677|GO:0006355
Prci8g0164 519 ProSiteProfiles 'Homeobox' domain profile. 425 488 IPR001356 GO:0003677
Prci8g0164 519 SMART prehox3 266 385 IPR006563 -
Prci8g0164 519 SMART HOX_1 428 492 IPR001356 GO:0003677
Prci8g0164 519 CDD homeodomain 428 489 IPR001356 GO:0003677
Prci8g0164 519 Gene3D - 431 508 - -
Prci8g0164 519 Pfam Associated with HOX 273 384 IPR006563 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0164 Prci-Chr8 969952 972990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0164 205 501 Homeobox Transcription Factor Family AT4G32980 53.312 4.05e-102 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Prci8g0164 POX 3e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0164 - - pcin:129318985 1048.5