Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0156 ATGGAAGGGGTTGAACCCAATGCAGGTTGTGGAGCTGTTGGGTTTCAAAATAGACGGCTTGAAATTCCAGAAGATGTTGATCCAGTAGTAGCACAAATTGTATGTGATTGTTGGCAAACGGAGCCACACTTGCGACCATCATTTTCACAGATCATGTCTCGTCTCCGCCACCTTCGGCGTCTAGTTGTTAGAACAACCAATCCAACTGACAAATTAAATGAAGTTGTCCTAGTAGAGAGCAATTGA 246 0.439 MEGVEPNAGCGAVGFQNRRLEIPEDVDPVVAQIVCDCWQTEPHLRPSFSQIMSRLRHLRRLVVRTTNPTDKLNEVVLVESN 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0156 81 SUPERFAMILY Protein kinase-like (PK-like) 16 66 IPR011009 -
Prci8g0156 81 Pfam Protein tyrosine and serine/threonine kinase 16 55 IPR001245 GO:0004672|GO:0006468
Prci8g0156 81 Gene3D Transferase(Phosphotransferase) domain 1 2 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0156 Prci-Chr8 943044 944244 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0156 2 61 MAP Kinase Kinase Kinase AT5G11850 63.333 1.80e-22 87.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Prci8g0156 PK_Tyr_Ser-Thr 5.5e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0156 K04424 - pcin:129317756 162.925