Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0136 ATGTCGACGGTATACGTGTTAGAACCGCCGACTAAAGGGAAGGTGGTGTTGAACACAACCCATGGTCCGCTCGACTTTGAGCTGTGGCCCAAGGAAGCCCCCAAGTCTGTCAGGAACTTCGTGCAGCTCTGCCTTGAAGGTTACTATGTTAACACCATCTTTCATCGTATCATCAAGGACTTTCTTATCCAGGGTGGCGATCCCACTGGCACCGGCACAGGGGGTGAAAGTATTTATGGGGGTGTCTTCTCTGATGAATTTCATTCGCGTTTAAGATTTAAACATAGAGGGTTAGTCGCAATGGCAAATGCTGGCTCCCCACACTCCAATGGGAGTCAGTTTTTCATAACTCTAGATCGTTGTGATTGGCTTGATCGGAAGCATACAATTTTTGGAAAGGTGACGGGAGACACTGTATACAATCTTCTAAGATTGGGTGAACTTGAAACTGATAAGAATGATCGGCCTCTAGATCCCCCAAAGATATTATCAATTGAGGTATTATGGAACCCATTTGATGATATTGTTCCCAGAACAATTCAGCCTCAGATCCAAACTACTACTGATACAGAAAGTAAAGATTCAAAGAAAAAAGCTGTAAAAAAACTGAACTTACTTTCATTCGGAGAAGAAGCTGAAGAAGAGGAAAAGGAGCTGGCATCTGTAAAACAAAAGATTAAGAGCAGTCATGATGTATTGAATGATCCTCGTCTTCTGAAGGAAGCAATTCCTGATAGTGAACTGGGCTCATCTGGTGGTAAGTCAACAAGAGATGTGCAGTTATCTGTAAGGGATGCCTTGAGCTTAAAAAAAGAAGAGTCTCTGAAAAAACTAGGAGCTGATGAGGTGGCCAACCATGATGACAGTGATGATGATGATGAGGCAGACTTTGATGCCAGAATGCGCAGTCAAATACTTAGAAAACGCCAAGAGTTAGGGGATTTACCACCCAAGCCAAGGTTGCAAAATGGAAGCTCAAGTCCAAAGAACCACAATTCACCAGCAATCAGGTCCAATGCTGTAAGTGTTGATGATGATCAACCTAGGGTGGAAAAATTGTCCATGAAGAAAAGGGGAATAGGATCTGAAGCAAGAGCTGAACGAATGGCAAATGCAGATGTAGATTTACAGTTGTTCAATGAATCTGAGAAAAATAGACAGTTGCAGAAGCAGAAGAAACGCAGAGTTCAAGGACGTGAAGATGAGGTTCTAGCAAAACTAGAGAAATTTAAGAAGGCTCTATCAGAAAAGACCACACCCTCAACTGGTGGATCTGGAGAAGTAAATGAAGAGGACTTGTTGGACTGGAAAGGAGCTAGCTTAAAATTTGCACCCGAGCCTGGCAAGGATCGGATGTCACGCAATGACGACCCTAACGACTATGTCGTGGTTGACCCCCTTTTGGAGAAGGGAAAAGAGAAGTTCAATAAGATGCACGCCAAACAAAAAAGACGAGAGCGAGAGTGGGCTGGCAAATCCCTTACTTGA 1488 0.4355 MSTVYVLEPPTKGKVVLNTTHGPLDFELWPKEAPKSVRNFVQLCLEGYYVNTIFHRIIKDFLIQGGDPTGTGTGGESIYGGVFSDEFHSRLRFKHRGLVAMANAGSPHSNGSQFFITLDRCDWLDRKHTIFGKVTGDTVYNLLRLGELETDKNDRPLDPPKILSIEVLWNPFDDIVPRTIQPQIQTTTDTESKDSKKKAVKKLNLLSFGEEAEEEEKELASVKQKIKSSHDVLNDPRLLKEAIPDSELGSSGGKSTRDVQLSVRDALSLKKEESLKKLGADEVANHDDSDDDDEADFDARMRSQILRKRQELGDLPPKPRLQNGSSSPKNHNSPAIRSNAVSVDDDQPRVEKLSMKKRGIGSEARAERMANADVDLQLFNESEKNRQLQKQKKRRVQGREDEVLAKLEKFKKALSEKTTPSTGGSGEVNEEDLLDWKGASLKFAPEPGKDRMSRNDDPNDYVVVDPLLEKGKEKFNKMHAKQKRREREWAGKSLT 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0136 495 MobiDBLite consensus disorder prediction 439 460 - -
Prci8g0136 495 Coils Coil 205 232 - -
Prci8g0136 495 CDD cyclophilin_CeCYP16-like 8 179 - -
Prci8g0136 495 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 49 66 IPR020892 GO:0003755|GO:0006457
Prci8g0136 495 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 113 125 IPR002130 GO:0000413|GO:0003755
Prci8g0136 495 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 98 113 IPR002130 GO:0000413|GO:0003755
Prci8g0136 495 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 126 141 IPR002130 GO:0000413|GO:0003755
Prci8g0136 495 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 54 66 IPR002130 GO:0000413|GO:0003755
Prci8g0136 495 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 28 43 IPR002130 GO:0000413|GO:0003755
Prci8g0136 495 Gene3D - 2 182 IPR029000 -
Prci8g0136 495 MobiDBLite consensus disorder prediction 344 370 - -
Prci8g0136 495 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 15 167 IPR002130 GO:0000413|GO:0003755
Prci8g0136 495 SUPERFAMILY Cyclophilin-like 14 180 IPR029000 -
Prci8g0136 495 MobiDBLite consensus disorder prediction 472 495 - -
Prci8g0136 495 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 22 167 IPR002130 GO:0000413|GO:0003755
Prci8g0136 495 MobiDBLite consensus disorder prediction 274 400 - -
Prci8g0136 495 MobiDBLite consensus disorder prediction 296 315 - -
Prci8g0136 495 MobiDBLite consensus disorder prediction 320 340 - -
Prci8g0136 495 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 11 217 IPR044666 -
Prci8g0136 495 MobiDBLite consensus disorder prediction 414 433 - -
Prci8g0136 495 FunFam Peptidyl-prolyl cis-trans isomerase CWC27 homolog 1 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0136 Prci-Chr8 799888 804830 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0136 9 172 U-box Gene Family AT5G67530 48.780 2.70e-44 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0136 K12737 - gmx:100793148 723.005