Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0135 ATGTCGACGGTATACGTGTTAGAACCGCCGACTAAAGGGAAGGTGGTGTTGAACACAACCCATGGTCCGCTCGACTTTGAGCTGTGGCCCAAGGAAGCCCCCAAGTCTGTCAGGAACTTCGTGCAGCTCTGCCTTGAAGGTTACTATGTTAACACCATCTTTCATCGTATCATCAAGGACTTTCTTATCCAGGGTGGCGATCCCACTGGCACCGGCACAGGGGGTGAAAGTATTTATGGGGGTGTCTTCTCTGATGAATTTCATTCGCGTTTAAGATTTAAACATAGAGGGTTAGTCGCAATGGCAAATGCTGGCTCCCCACACTCCAATGGGAGTCAGTTTTTCATAACTCTAGATCGTTGTGATTGGCTTGATCGGAAGCATACAATTTTTGGAAAGGTGACGGGAGACACTGTATACAATCTTCTAAGATTGGGTGAACTTGAAACTGATAAGAATGATCGGCCTCTAGATCCCCCAAAGATATTATCAATTGAGGTATTATGGAACCCATTTGATGATATTGTTCCCAGAACAATTCAGCCTCAGATCCAAACTACTACTGATACAGAAAGTAAAGATTCAAAGAAAAAAGCTGTAAAAAAACTGAACTTACTTTCATTCGGAGAAGAAGCTGAAGAAGAGGAAAAGGAGCTGGCATCTGTAAAACAAAAGATTAAGAGCAGTCATGATGTATTGAATGATCCTCGTCTTCTGAAGGAAGCAATTCCTGATAGTGAACTGGGCTCATCTGGTGGTAAGTCAACAAGAGATGTGCAGTTATCTGTAAGGGATGCCTTGAGCTTAAAAAAAGAAGAGTCTCTGAAAAAACTAGGAGCTGATGAGGTGGCCAACCATGATGACAGTGATGATGATGATGAGGCAGACTTTGATGCCAGAATGCGCAGTCAAATACTTAGAAAACGCCAAGAGTTAGGGGATTTACCACCCAAGCCAAGGTTGCAAAATGCAGGAAGCTCAAGTCCAAAGAACCACAATTCACCAGCAATCAGGTCCAATGCTGTAAGTGTTGATGATGATCAACCTAGGGTGGAAAAATTGTCCATGAAGAAAAGGGGAATAGGATCTGAAGCAAGAGCTGAACGAATGGCAAATGCAGATGTAGATTTACAGTTGTTCAATGAATCTGAGAAAAATAGACAGTTGCAGAAGCAGAAGAAACGCAGAGTTCAAGGACGTGAAGATGAGGTTCTAGCAAAACTAGAGAAATTTAAGAAGGCTCTATCAGAAAAGACCACACCCTCAACTGGTGGATCTGGAGAAGTAAATGAAGAGGACTTGTTGGACTGGAAAGGAGCTAGCTTAAAATTTGCACCCGAGCCTGGCAAGGATCGGATGTCACGCAATGACGACCCTAACGACTATGTCGTGGTTGACCCCCTTTTGGAGAAGGGAAAAGAGAAGTTCAATAAGATGCACGCCAAACAAAAAAGACGAGAGCGAGAGTGGGCTGGCAAATCCCTTACTTGA 1491 0.4359 MSTVYVLEPPTKGKVVLNTTHGPLDFELWPKEAPKSVRNFVQLCLEGYYVNTIFHRIIKDFLIQGGDPTGTGTGGESIYGGVFSDEFHSRLRFKHRGLVAMANAGSPHSNGSQFFITLDRCDWLDRKHTIFGKVTGDTVYNLLRLGELETDKNDRPLDPPKILSIEVLWNPFDDIVPRTIQPQIQTTTDTESKDSKKKAVKKLNLLSFGEEAEEEEKELASVKQKIKSSHDVLNDPRLLKEAIPDSELGSSGGKSTRDVQLSVRDALSLKKEESLKKLGADEVANHDDSDDDDEADFDARMRSQILRKRQELGDLPPKPRLQNAGSSSPKNHNSPAIRSNAVSVDDDQPRVEKLSMKKRGIGSEARAERMANADVDLQLFNESEKNRQLQKQKKRRVQGREDEVLAKLEKFKKALSEKTTPSTGGSGEVNEEDLLDWKGASLKFAPEPGKDRMSRNDDPNDYVVVDPLLEKGKEKFNKMHAKQKRREREWAGKSLT 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0135 496 MobiDBLite consensus disorder prediction 440 496 - -
Prci8g0135 496 MobiDBLite consensus disorder prediction 321 341 - -
Prci8g0135 496 Coils Coil 205 232 - -
Prci8g0135 496 MobiDBLite consensus disorder prediction 277 401 - -
Prci8g0135 496 MobiDBLite consensus disorder prediction 415 434 - -
Prci8g0135 496 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 15 167 IPR002130 GO:0000413|GO:0003755
Prci8g0135 496 CDD cyclophilin_CeCYP16-like 8 179 - -
Prci8g0135 496 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 28 43 IPR002130 GO:0000413|GO:0003755
Prci8g0135 496 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 98 113 IPR002130 GO:0000413|GO:0003755
Prci8g0135 496 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 113 125 IPR002130 GO:0000413|GO:0003755
Prci8g0135 496 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 54 66 IPR002130 GO:0000413|GO:0003755
Prci8g0135 496 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 126 141 IPR002130 GO:0000413|GO:0003755
Prci8g0135 496 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 49 66 IPR020892 GO:0003755|GO:0006457
Prci8g0135 496 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 11 217 IPR044666 -
Prci8g0135 496 SUPERFAMILY Cyclophilin-like 14 180 IPR029000 -
Prci8g0135 496 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 22 167 IPR002130 GO:0000413|GO:0003755
Prci8g0135 496 MobiDBLite consensus disorder prediction 296 315 - -
Prci8g0135 496 MobiDBLite consensus disorder prediction 345 371 - -
Prci8g0135 496 MobiDBLite consensus disorder prediction 467 496 - -
Prci8g0135 496 Gene3D - 2 182 IPR029000 -
Prci8g0135 496 FunFam Peptidyl-prolyl cis-trans isomerase CWC27 homolog 1 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0135 Prci-Chr8 799888 804832 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0135 9 172 U-box Gene Family AT5G67530 48.780 2.21e-44 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0135 K12737 - gmx:100793148 729.169