Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0126 ATGGAGGAGATGTCTTCTGCGATTGCAGTGCCATTGAGAGTAGGTAATTCAGTTTGTGATAACCCGACCACAGCTACCCATATGGATGTGTCCAGACTTAAGCTGATGGCAGATGCTGGGTTGTTATCTAATTCAATATCAAAGGTTTCAACTGAGACGGTTGCAGATTCTGAGGAGGATCATAATGGTGGGAATCTGGAGAATCAGGTTAGCATTACCGCAGTCTCAGCACCAAAACCTGATAGGGAAGAAGAGATCCCTTTGTTGGATACGATATCCCAAGATAAAAGCACATCAGTTGCTGGTGATGAAATTGTAACCCCAGAAATTGAGGATGATGATACAATATCATTGGAGGGTGATCAGATCATTGACAGCTCTTGTTCTCTTTCTGTAGTCAGCGAGAACAGTAGCATATGTGGGGAGGAGTCGTTCAGTTTTGAGGCTACTTCTGAGATAAAGACACCAAGTGTCATTGACATGGAGAAGAGCATTTGTATCCGGCCTGCTGATTTAGAGGAGTCTAATGTTGAGCCAGAAAGTGTTGGTGAACCCCTTGCTGTGGCAGTGAGCCTTGAAGAAGAGTCTGGAGTTGGATCTGGCACACAACCTTCTGCGGTTGTTCTTCAGCTGCCTCTAGAAAAAGTGGTGAGTGGAACAGTTGGTCGTAGTGTTTTTGAATTAGATTATGCCCCACTTTGGGGATTCATTTCTATGTGTGGAAGAAGACCTGAGATGGAAGATGCAGTTGCAACTGTGGCTCGATTTATGAAAATTCCTGTTCAAATGCTAATCAGTGACAGGGTCATTGATGGAATGAGCAAGTGCTTGAGCCAGCAGACAATTCATTTCTTTGGAGTTTATGATGGCCATGGTGGCTCTCAGGTGGCAAATTATTGCCGTGACCGTGTCCATTTGGCTTTGGCTGAGGAAATAGAATTTGTAAAAGAAGCTCTTATAAATGGAAGTGTTAAGGATACCATTCAAGATCAGTGGAAAAAAGCCTTCACCAATTGTTTCTTAAAGGTTGATGCTGAAGTTGGAGGAAAAGCTAACTGTGAGCCTGTTGCTCCAGAAACTGTTGGTTCCACTGCTGTTGTTGCTATTATTTGTGCATCTCATATCATTGTTGCAAATTGTGGTGATTCAAGAGCAGTTCTGTGCCGTGGCAAAGAACCCATGGCATTGTCAGTGGATCATAAACCTAACCGGGATGATGAATATGCAAGAATTGAAGCAGCTGGAGGCAAGGTGATACAATGGAATGGTCATCGTGTGTTTGGTGTTCTTGCAATGTCTAGGTCTATAGGTGATAGATATTTGAAGCCATGGATTATTCCAGAACCAGAAGTCACGTTTCTTCCTCGTGCAAAAGACGATGAATGCCTCATTCTGGCCAGTGATGGTCTGTGGGATGTCGTGACGAACGAAGAGGCCTGTGACCTAGCTCGAAGACGAATACTTCTGTGGCACAAGAAAAATGGTGTTGCACTAGCCTCCGAGAGGGGAGAGGGTGCTGACCCTGCTGCTCAAGCAGCGGCAGAGTATCTGTCAAACCGTGCACTCCAGAAGGGAAGCAAAGATAACATCACTGTGATTGTGGTGGATTTGAAAGGTCAAAGGAAATTTAAGAGCAAGACATGA 1644 0.4446 MEEMSSAIAVPLRVGNSVCDNPTTATHMDVSRLKLMADAGLLSNSISKVSTETVADSEEDHNGGNLENQVSITAVSAPKPDREEEIPLLDTISQDKSTSVAGDEIVTPEIEDDDTISLEGDQIIDSSCSLSVVSENSSICGEESFSFEATSEIKTPSVIDMEKSICIRPADLEESNVEPESVGEPLAVAVSLEEESGVGSGTQPSAVVLQLPLEKVVSGTVGRSVFELDYAPLWGFISMCGRRPEMEDAVATVARFMKIPVQMLISDRVIDGMSKCLSQQTIHFFGVYDGHGGSQVANYCRDRVHLALAEEIEFVKEALINGSVKDTIQDQWKKAFTNCFLKVDAEVGGKANCEPVAPETVGSTAVVAIICASHIIVANCGDSRAVLCRGKEPMALSVDHKPNRDDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVTFLPRAKDDECLILASDGLWDVVTNEEACDLARRRILLWHKKNGVALASERGEGADPAAQAAAEYLSNRALQKGSKDNITVIVVDLKGQRKFKSKT 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0126 547 Gene3D - 220 547 IPR036457 -
Prci8g0126 547 ProSiteProfiles PPM-type phosphatase domain profile. 233 537 IPR001932 -
Prci8g0126 547 Pfam Protein phosphatase 2C 269 530 IPR001932 -
Prci8g0126 547 SUPERFAMILY PP2C-like 229 539 IPR036457 -
Prci8g0126 547 CDD PP2Cc 238 537 IPR001932 -
Prci8g0126 547 ProSitePatterns PPM-type phosphatase domain signature. 284 292 IPR000222 GO:0043169
Prci8g0126 547 PANTHER PROTEIN PHOSPHATASE 175 537 IPR015655 GO:0004722|GO:0006470
Prci8g0126 547 SMART PP2C_4 219 535 IPR001932 -
Prci8g0126 547 FunFam Protein phosphatase 2C 16 221 547 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0126 Prci-Chr8 768154 773128 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0126 1 547 PP2C-type Phosphatase Gene Family AT1G17550 48.929 1.46e-169 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0126 K14497 - gmx:100805281 826.239