Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0125 ATGGTCCCGAACATGAGTGACGATATTTCAGCTGAGGGTGACTTCACTTGCCATCAGTGGCCTTTGGAGCTCTCTGAGTACTTGAAATTCGATGGTGATCATTGGCCAGACAATGATCAAGATCAGTGTTTTGTTCCTGGCGGGCTTGTTCCCAACCAGTTGATCTATCAGAGCTCCGTTGAAGTAAGTGACTTGGGAGGACGTGGCAGCCACGTTGAAGGGTCTGCTAGCTGTGGTAGTACCAGAGACATTATTATCAACGGACGCCAGAAGAAGGAAGGTAGGGAGAGATTTGCATTCAGAACAAGGTCAGAGGTTGAAGTGCTGGACGATGGCTACAAGTGGAGGAAGTATGGGAAGAAGATGGTGAAGAATAGCCCAAATCCAAGGAATTACTACAGGTGTTCAGAGGAAGGATGCCCTGTGAAAAAGAGAGTGGAGAGAGATGGGGATGATCCCAGGTATGTCATAACAACCTACGAAGGCATCCACACGCACAGCAGTTTTTACTAG 513 0.4795 MVPNMSDDISAEGDFTCHQWPLELSEYLKFDGDHWPDNDQDQCFVPGGLVPNQLIYQSSVEVSDLGGRGSHVEGSASCGSTRDIIINGRQKKEGRERFAFRTRSEVEVLDDGYKWRKYGKKMVKNSPNPRNYYRCSEEGCPVKKRVERDGDDPRYVITTYEGIHTHSSFY 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0125 170 Pfam WRKY DNA -binding domain 110 166 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci8g0125 170 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 89 167 IPR044810 GO:0003700
Prci8g0125 170 ProSiteProfiles WRKY domain profile. 104 169 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci8g0125 170 FunFam WRKY transcription factor 57 95 169 - -
Prci8g0125 170 SMART WRKY_cls 109 168 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci8g0125 170 SUPERFAMILY WRKY DNA-binding domain 101 167 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci8g0125 170 Gene3D WRKY domain 96 162 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0125 Prci-Chr8 765464 766825 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0125 97 169 WRKY Transcription Factor Family AT5G26170 82.192 7.19e-41 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci8g0125 WRKY 4e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0125 - - gmx:100819462 197.593