Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0119 ATGCACCTGATAGGGTTAGCCTGTATACAAGGATCGCTAATCTTCCAACACTGTCTACTGAGATTCGTACTTGGGAAGCCCATAGAGAGCAAGGAAAGAAAAAATCACCCGCTTCCAGTCAAAGCCACACAGCTAAACCTAGACCGAGGACGATCTAAAGATGAGCCACAGCCGTCAAAAGCAATAATATCGGAACCAAAGGAGGATGAAGCAGCTGGTGTGGAAGATCAGAAGGAAGAGGAGGAGGACCAAGATAAAGTGTGTACGGAATGTGGACAGAAAGAATGGTGGGTTTCTTGTTCCAAATGTGGCAGTTGGACCCATGGAAACTGTGCCAACATTTCCTCTTCGTCCGAGCTTGTCAAGAAGAAGGATAACTATGCATGTCTGTCCTGTACAAAGCCTCCTAAAAAGAGAAAGTTTCGATCATCATGA 435 0.4552 MHLIGLACIQGSLIFQHCLLRFVLGKPIESKERKNHPLPVKATQLNLDRGRSKDEPQPSKAIISEPKEDEAAGVEDQKEEEEDQDKVCTECGQKEWWVSCSKCGSWTHGNCANISSSSELVKKKDNYACLSCTKPPKKRKFRSS 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0119 144 MobiDBLite consensus disorder prediction 47 73 - -
Prci8g0119 144 Pfam PHD-finger 88 134 IPR019787 -
Prci8g0119 144 ProSiteProfiles Zinc finger PHD-type profile. 85 135 IPR019787 -
Prci8g0119 144 SMART PHD_3 87 133 IPR001965 -
Prci8g0119 144 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 45 140 IPR013083 -
Prci8g0119 144 MobiDBLite consensus disorder prediction 34 85 - -
Prci8g0119 144 SUPERFAMILY FYVE/PHD zinc finger 77 140 IPR011011 -
Prci8g0119 144 ProSitePatterns Zinc finger PHD-type signature. 88 132 IPR019786 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Prci8g0119 PHD 5.7e-07 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0119 - K14435 pcin:129317879 290.426