Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0112 ATGGGGGATCCCATTGCCATTGTTCCATACGACCCACACGATGAAGATGCCACCATGATTCTTAATTTCAGCGGCCATAATCCCACGCTTCTTGATTCACACAACCACGCACAGTTTTCTTGCTTTTCCTCGCCGTTGCCTGAACTGGATGTGGATGATGCAGCAGCCATACTGGCCGACATTGATTCATATTTAGATGATACGAGTTTTTCCGTTGGAGCGTCAGACAATAACAACGTTGAAGCGGGTCCTTCAGAAATTCGCCAGCACAATCTTCCGGTTTCTCATCAGAATCTGGATGTAGCATTTTCGTGGCAGGGCTCACCAATACCATTTTCTTGCACTCTCTGTCAAGTGCTTCGCGAAATAGTTCATACTGATTGTATTCATTTTTCCAAACTCCAAATTCACGGCACGCTCGGGCTCATCTCTCATGCGGTTTTTTATCAGAATGCCGGTGTGCGTTCTTCGGCCCATCAACGATTTCAAATATTCGATTTTTCCGATAAAAGCTTGTACCAAATCAAGGCTTTCCTAGTCCGACACTGCTTGATCCAAAGTTCAATGGGCTACTTCATGATGCAAGATCCACTTTCTTCCTATTATGAAGCCCTCTGCTGTGGATTGGATTGGGCTGAAGACTCCCGTGATGACTTCAGTGACCATAAACCTGAAACTTCGGGAGCAAAATCTGGCATGGAACAAGAGGAGGAGGCCGGGGATGGCACAGCAAGGACTTCAAACACTTGCCATGCGGAACAGAGGGAGAGGATCGCGAGGATGAAATTGAGCGATATGAGAGGATTCTTTAGTCTGCCTATTCAAAAAGCAGCCAAGAAATTGAAGTTATGTCCCACTGTTATGAAGAAAATATGTCGTAAAGAAGGACTACAGCAATGGCCTTACAGAAAGGTAAAAAGCTTGGTGAGGCAAATATCAATACTGAGAAGGGCTCTGGAATCAGAAGATGGTGCGTCAACAAGGTCACAAACCGAAGCAGAAATTGAGAGACTAGAACAGGAAATATTTCGGCGCTGTGGTGGATTCCCCCCAACTTCATGGAATTTCGAATGA 1074 0.4544 MGDPIAIVPYDPHDEDATMILNFSGHNPTLLDSHNHAQFSCFSSPLPELDVDDAAAILADIDSYLDDTSFSVGASDNNNVEAGPSEIRQHNLPVSHQNLDVAFSWQGSPIPFSCTLCQVLREIVHTDCIHFSKLQIHGTLGLISHAVFYQNAGVRSSAHQRFQIFDFSDKSLYQIKAFLVRHCLIQSSMGYFMMQDPLSSYYEALCCGLDWAEDSRDDFSDHKPETSGAKSGMEQEEEAGDGTARTSNTCHAEQRERIARMKLSDMRGFFSLPIQKAAKKLKLCPTVMKKICRKEGLQQWPYRKVKSLVRQISILRRALESEDGASTRSQTEAEIERLEQEIFRRCGGFPPTSWNFE 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0112 357 ProSiteProfiles RWP-RK domain profile. 239 328 IPR003035 -
Prci8g0112 357 MobiDBLite consensus disorder prediction 218 241 - -
Prci8g0112 357 Pfam RWP-RK domain 261 308 IPR003035 -
Prci8g0112 357 Coils Coil 321 341 - -
Prci8g0112 357 PANTHER PROTEIN RKD4 93 342 IPR044607 GO:0003700
Prci8g0112 357 MobiDBLite consensus disorder prediction 218 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0112 Prci-Chr8 730327 732157 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0112 261 325 NLP Transcription Factor Family AT4G24020 41.538 1.41e-12 67.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Prci8g0112 RWP-RK 5.7e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0112 - - pcin:129317579 719.153