Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0107 ATGGATCCGCGGACCAGTCAGGGACGGAAGAAGGAACCTTGCCGAGGAGCCTGGAAACCCGAGGAAGACAAGAAACTGGTTCAAATCATTGAATTACATGGCCCCAAGAGGTGGAAGCTTATTGCAGCCAAAGCAGGTCTGAATCGATGCGGCAAGAGTTGCAGACTGAGATGGTTAAATTACCTCAGACCCAATATCAAGAGAGGCAATATATCAGACCAAGAGGAGGACTTGATACTCAGGCTTCACAAACTCCTAGGCAACAGGTGGTCTTTGATAGCTGGAAGACTCCCGGGTCGAACTGATAATGAGATTAAGAATTACTGGAACTCTCATTTGAGCAAGAAGATAAGTCCGAGAAAACAGAACAGAGGTTTCAAAAAAGATTTAACGCCGGAGATAACCACATCACCCAAGAAAGCTGCACTTAGTGTTAGTAATGAAGAGCAAGGTAACACTAAGGTGACGGAGGACTCGAAGTCTGGCTTTGTCGAAGACCGTGAATTGTTCATTCATTGTAGCAGCGAAGGACCGATAAATTTGGAATGGGTGGGCAAGTTTCTTGAAATGGACGAAACTTGTTTTGGATTTGCAGATCAGTGA 603 0.4527 MDPRTSQGRKKEPCRGAWKPEEDKKLVQIIELHGPKRWKLIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKISPRKQNRGFKKDLTPEITTSPKKAALSVSNEEQGNTKVTEDSKSGFVEDRELFIHCSSEGPINLEWVGKFLEMDETCFGFADQ 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0107 200 Gene3D - 71 149 - -
Prci8g0107 200 Gene3D - 14 67 - -
Prci8g0107 200 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 62 IPR017930 -
Prci8g0107 200 FunFam MYB-related transcription factor 14 67 - -
Prci8g0107 200 MobiDBLite consensus disorder prediction 137 158 - -
Prci8g0107 200 CDD SANT 72 113 IPR001005 -
Prci8g0107 200 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
Prci8g0107 200 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Prci8g0107 200 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 6 150 - -
Prci8g0107 200 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Prci8g0107 200 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Prci8g0107 200 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Prci8g0107 200 MobiDBLite consensus disorder prediction 137 152 - -
Prci8g0107 200 CDD SANT 17 62 IPR001005 -
Prci8g0107 200 SUPERFAMILY Homeodomain-like 15 109 IPR009057 -
Prci8g0107 200 SMART sant 14 64 IPR001005 -
Prci8g0107 200 SMART sant 67 115 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0107 Prci-Chr8 703717 704869 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0107 15 199 MYB Transcription Factor Family AT5G52600 48.421 1.21e-54 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci8g0107 Myb_DNA-binding 2.9e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0107 K09422 - qsu:111997867 260.381